RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 INTS6LQ5JSJ4 861 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 CMTM8Q8IZV2 173 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 CSGALNACT2Q8N6G5 542 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 DDX43Q9NXZ2 648 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 SIX4Q9UIU6 781 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 MYO15AQ9UKN7 3530 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 OBSL1O75147 1896 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 SLC38A8A6NNN8 435 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 EIF3DO15371 548 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 PRPF40AO75400 957 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 PRPF6O94906 941 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 SDHBP21912 280 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 HOXA6P31267 233 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 RPL10AP62906 217 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 BFSP1Q12934 665 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 STK38Q15208 465 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 E2F4Q16254 413 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 ITPRIPL2Q3MIP1 535 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 TRMT2BQ96GJ1 504 aaKnown RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 MYRFLQ96LU7 910 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 KIAA1586Q9HCI6 787 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 INTS13Q9NVM9 706 aa12.32□□□□□ -0.44
SCFD1-206ENST00000484733 UXTQ9UBK9 157 aaPredicted RBP12.32□□□□□ -0.44
SCFD1-206ENST00000484733 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 SPTLC2O15270 562 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 PDIA4P13667 645 aaKnown RBP12.31□□□□□ -0.44
SCFD1-206ENST00000484733 CNR2P34972 360 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 SOX9P48436 509 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 AMPD3Q01432 767 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 SATB1Q01826 763 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 MON1AQ86VX9 555 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 OSTM1Q86WC4 334 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCFD1-206ENST00000484733 ANKRD36BP1Q96IX9 119 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-206ENST00000484733 FAM83CQ9BQN1 747 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 PDE11AQ9HCR9 933 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 ZNF233A6NK53 670 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 YEATS4O95619 227 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 PCSK1P29120 753 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 MAGEA11P43364 429 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
SCFD1-206ENST00000484733 CCINQ13939 588 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 CFAP221Q4G0U5 840 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 LAIR1Q6GTX8 287 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 TXNDC11Q6PKC3 985 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 EPM2AIP1Q7L775 607 aaPredicted RBP12.31□□□□□ -0.44
SCFD1-206ENST00000484733 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 ZNF507Q8TCN5 953 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 TRIM9Q9C026 710 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
SCFD1-206ENST00000484733 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 K7ESF4 209 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 CUTAO60888 179 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 LONP2Q86WA8 852 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 PDILTQ8N807 584 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 MRPS31Q92665 395 aaKnown RBP12.3□□□□□ -0.44
SCFD1-206ENST00000484733 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
SCFD1-206ENST00000484733 SNX21Q969T3 373 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 C7orf25Q9BPX7 421 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 MAGEF1Q9HAY2 307 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 GKN1Q9NS71 199 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 GMEB2Q9UKD1 530 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 OTOGLQ3ZCN5 2332 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 CFAP54Q96N23 3096 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 UBE4BO95155 1302 aa12.3□□□□□ -0.44
SCFD1-206ENST00000484733 LRP3O75074 770 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 TNNC2P02585 160 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 TGM1P22735 817 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 HOXD13P35453 343 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 AVPR1AP37288 418 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 GPR15P49685 360 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 RUNX3Q13761 415 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 PON2Q15165 354 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 SOWAHAQ2M3V2 549 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 DGLUCYQ7Z3D6 616 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 WDR49Q8IV35 697 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 ADGRF2Q8IZF7 708 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 MTMR12Q9C0I1 747 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 HPS4Q9NQG7 708 aa12.29□□□□□ -0.44
SCFD1-206ENST00000484733 RBM12Q9NTZ6 932 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms