RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	RIN3	Q8TB24	985 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	GIPC2	Q8TF65	315 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	EZH1	Q92800	747 aa	Predicted RBP	13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	GATA6	Q92908	595 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	ACD	Q96AP0	544 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	ADAM33	Q9BZ11	813 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	CCSER1	Q9C0I3	900 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	LARS	Q9P2J5	1176 aa	Known RBP	13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	CPSF3	Q9UKF6	684 aa	Known RBP	13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	CEP295	Q9C0D2	2601 aa		13.45	□□□□□ -0.26
PABPC4-215	ENST00000484555	MYH11	P35749	1972 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555		A0A0B4J269	797 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	KHNYN	O15037	678 aa	Known RBP	13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	NEK4	P51957	841 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	ACAP1	Q15027	740 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	JADE1	Q6IE81	842 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	METTL23	Q86XA0	190 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	THEM5	Q8N1Q8	247 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	CCDC26	Q8TAB7	109 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	CD101	Q93033	1021 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	LLPH	Q9BRT6	129 aa	Known RBP	13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	ECT2	Q9H8V3	914 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	TMEM9B	Q9NQ34	198 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	PCDHB6	Q9Y5E3	794 aa		13.44	□□□□□ -0.26
PABPC4-215	ENST00000484555	KIAA1549L	Q6ZVL6	1849 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	ATG2B	Q96BY7	2078 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	CYB561D2	O14569	222 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	OBSL1	O75147	1896 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	CSH1	P0DML2	217 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	CSH2	P0DML3	217 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	ANK1	P16157	1881 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	NMT1	P30419	496 aa	Known RBP	13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	LIG4	P49917	911 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	SLC12A3	P55017	1021 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	FAM160A1	Q05DH4	1040 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	RAD51AP2	Q09MP3	1159 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	MTF1	Q14872	753 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	USP39	Q53GS9	565 aa	Known RBP	13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	NAIF1	Q69YI7	327 aa	Predicted RBP	13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	TXNDC8	Q6A555	127 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	DTHD1	Q6ZMT9	781 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	RASSF3	Q86WH2	238 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	DCP1B	Q8IZD4	617 aa	Known RBP	13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	CPA6	Q8N4T0	437 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	OSCP1	Q8WVF1	389 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	NUP205	Q92621	2012 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	MRPS31	Q92665	395 aa	Known RBP	13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	BICD1	Q96G01	975 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	PNMA5	Q96PV4	448 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	ASB7	Q9H672	318 aa		13.43	□□□□□ -0.26
PABPC4-215	ENST00000484555	MYO16	Q9Y6X6	1858 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	SRRM3	A6NNA2	597 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	HNRNPDL	O14979	420 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	TOP3B	O95985	862 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	NFIC	P08651	508 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	TCF3	P15923	654 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	SPINK2	P20155	84 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	GBP1	P32455	592 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	TAF6	P49848	677 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	DGKE	P52429	567 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	HMGN5	P82970	282 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	POU5F1	Q01860	360 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	GNL2	Q13823	731 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	TMEM132D	Q14C87	1099 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ZNF77	Q15935	545 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ARSH	Q5FYA8	562 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ATP2A3	Q93084	1043 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	MYRFL	Q96LU7	910 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	SCNM1	Q9BWG6	230 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	TMEM206	Q9H813	350 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	DUS2	Q9NX74	493 aa	Known RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ABI2	Q9NYB9	513 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	UXT	Q9UBK9	157 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	EVL	Q9UI08	416 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ODF2L	Q9ULJ1	636 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	C2CD2	Q9Y426	696 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	PCDHB5	Q9Y5E4	795 aa		13.42	□□□□□ -0.26
PABPC4-215	ENST00000484555	ZNF638	Q14966	1978 aa	Known RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	ATRX	P46100	2492 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	SCN1A	P35498	2009 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	TADA3	O75528	432 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	NOL4	O94818	638 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	PLA2G4B	P0C869	781 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	IRX4	P78413	519 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	USP4	Q13107	963 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	NFE2	Q16621	373 aa	Predicted RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	EML3	Q32P44	896 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	WSCD1	Q658N2	575 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	LRSAM1	Q6UWE0	723 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	TSTD1	Q8NFU3	115 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	LEO1	Q8WVC0	666 aa	Predicted RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	FAM212A	Q96EL1	285 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	TRMT2B	Q96GJ1	504 aa	Known RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	CNOT6L	Q96LI5	555 aa	Known RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	PYM1	Q9BRP8	204 aa	Known RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	MSTO1	Q9BUK6	570 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	LIMCH1	Q9UPQ0	1083 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	NEUROG3	Q9Y4Z2	214 aa		13.41	□□□□□ -0.26
PABPC4-215	ENST00000484555	DMXL2	Q8TDJ6	3036 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms