RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 RANBP17Q9H2T7 1088 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 EHMT1Q9H9B1 1298 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 MRPL47Q9HD33 250 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 MRPL11Q9Y3B7 192 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 MAGEA13PA6NCF6 341 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 SGK1O00141 431 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 TM9SF1O15321 606 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 PLCB3Q01970 1234 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 KRT72Q14CN4 511 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 SPOCD1Q6ZMY3 1216 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 PDCD7Q8N8D1 485 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 FEZF2Q8TBJ5 459 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 STMN2Q93045 179 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 ZNF184Q99676 751 aaPredicted RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 TIPINQ9BVW5 301 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 EXOC7Q9UPT5 735 aa20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 MTO1Q9Y2Z2 717 aaKnown RBP20.76■□□□□ 0.91
RPUSD3-216ENST00000484134 E5RJQ4 531 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 F8VP50 259 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 FCHO1O14526 889 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 MAP3K7O43318 606 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 PRKD1Q15139 912 aaPredicted RBP20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ABRAQ8N0Z2 381 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 FAM213AQ9BRX8 229 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ACSS3Q9H6R3 686 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ZNF212Q9UDV6 495 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 RNF8O76064 485 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 DHRS4L1P0CG22 281 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 BGNP21810 368 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 PGM1P36871 562 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ETV4P43268 484 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 GDF10P55107 478 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 ALYREFQ86V81 257 aaKnown RBP20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 CPT1BQ92523 772 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 RBM41Q96IZ5 413 aaKnown RBP20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 SERAC1Q96JX3 654 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 NMUR2Q9GZQ4 415 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 MMADHCQ9H3L0 296 aaPredicted RBP20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 PCDH9Q9HC56 1237 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 FBXO28Q9NVF7 368 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 SNCAIPQ9Y6H5 919 aa20.75■□□□□ 0.91
RPUSD3-216ENST00000484134 FAM237BA0A1B0GVD1 139 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 TCRBV7S3A2A0A539 114 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 LYPLA2O95372 231 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 MYL2P10916 166 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 TRAF1Q13077 416 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 SLC5A9Q2M3M2 681 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 HSF5Q4G112 596 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 XKR9Q5GH70 373 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 LDHDQ86WU2 507 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 PHF13Q86YI8 300 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 RHPN2Q8IUC4 686 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 PPFIBP2Q8ND30 876 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 NKD2Q969F2 451 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 OXNAD1Q96HP4 312 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 SENP7Q9BQF6 1050 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 AGO4Q9HCK5 861 aaKnown RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 AHDC1Q5TGY3 1603 aaPredicted RBP20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 LTBP4Q8N2S1 1624 aa20.74■□□□□ 0.91
RPUSD3-216ENST00000484134 hCG_1818297A0A087WSY0 165 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 KLRG2A4D1S0 409 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 ITGAVP06756 1048 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 ZCCHC18P0CG32 403 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 OGDHQ02218 1023 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 DLGAP5Q15398 846 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 TREML1Q86YW5 311 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 ATP11CQ8NB49 1132 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 FBXO36Q8NEA4 188 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 FAM111AQ96PZ2 611 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 FETUBQ9UGM5 382 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 G3V3G9 751 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 ZC3H11AO75152 810 aaKnown RBP eCLIP20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 HLA-DRAP01903 254 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 SERPINB4P48594 390 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 BPIFB4P59827 614 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 TKFCQ3LXA3 575 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 DCAF8Q5TAQ9 597 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 TMEM270Q6UE05 265 aa20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 TDRD3Q9H7E2 651 aaKnown RBP20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 APOBEC3GQ9HC16 384 aaKnown RBP20.73■□□□□ 0.91
RPUSD3-216ENST00000484134 TMEM191CA6NGB0 347 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 LPXNO60711 386 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 TGDSO95455 350 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 TMEM191BP0C7N4 346 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 AOC3Q16853 763 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 NBPF20Q3BBV1 942 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 BRDTQ58F21 947 aaPredicted RBP20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 GPD1LQ8N335 351 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 TTC17Q96AE7 1141 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 VCPIP1Q96JH7 1222 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 CLPTM1LQ96KA5 538 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 FAM161BQ96MY7 647 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 GORASP1Q9BQQ3 440 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 KMT5AQ9NQR1 393 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 DDX43Q9NXZ2 648 aaKnown RBP20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 IP6K2Q9UHH9 426 aa20.72■□□□□ 0.91
RPUSD3-216ENST00000484134 PTPRJQ12913 1337 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms