RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 CST5P28325 142 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 USP8P40818 1118 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 TNFSF9P41273 254 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 WNT7BP56706 349 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 MYL6P60660 151 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 NOP14P78316 857 aaKnown RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 RBP5P82980 135 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CENPCQ03188 943 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PTPN11Q06124 597 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 BRD3Q15059 726 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ZBTB6Q15916 424 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PPP2R5EQ16537 467 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM132AQ24JP5 1023 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CLEC16AQ2KHT3 1053 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 SLC10A6Q3KNW5 377 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 XKR4Q5GH76 650 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 GNASQ5JWF2 1037 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 EEF1DP3Q658K8 133 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 C11orf63Q6NUN7 778 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 WDR93Q6P2C0 686 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 NOTUMQ6P988 496 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 SLC27A1Q6PCB7 646 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ALKAL1Q6UXT8 129 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PEX26Q7Z412 305 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 RSPH3Q86UC2 560 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PHF13Q86YI8 300 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 THNSL1Q8IYQ7 743 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 C7orf31Q8N865 590 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PCSK9Q8NBP7 692 aaKnown RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CXorf38Q8TB03 319 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ACTRT1Q8TDG2 376 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 HES6Q96HZ4 224 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PI4K2AQ9BTU6 479 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC94Q9BW85 323 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PACSIN1Q9BY11 444 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 SEZ6LQ9BYH1 1024 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 BCO2Q9BYV7 579 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 NIF3L1Q9GZT8 377 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 XYLT2Q9H1B5 865 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 MFSD1Q9H3U5 465 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 APOBEC3GQ9HC16 384 aaKnown RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CHST12Q9NRB3 414 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ARGLU1Q9NWB6 273 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 HDAC6Q9UBN7 1215 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CD207Q9UJ71 328 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 GTF3C4Q9UKN8 822 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ITGA11Q9UKX5 1188 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 NUB1Q9Y5A7 615 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 LINC01553A4QN01 128 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC151A5D8V7 595 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MYADML2A6NDP7 307 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MED7O43513 233 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 KIF4AO95239 1232 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MMEP08473 750 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MYL3P08590 195 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PNMA6AP0CW24 399 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 KRT5P13647 590 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 KCNE1P15382 129 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CYP3A5P20815 502 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CDH5P33151 784 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SLC1A1P43005 524 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CLCN5P51795 746 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 YARSP54577 528 aaKnown RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF200P98182 395 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 TFAMQ00059 246 aaKnown RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 LMNB2Q03252 620 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MYO1EQ12965 1108 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 ELF2Q15723 593 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 KIZQ2M2Z5 673 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CTC1Q2NKJ3 1217 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SEZ6Q53EL9 994 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SOWAHCQ53LP3 525 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF667Q5HYK9 610 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CCDC70Q6NSX1 233 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM270Q6UE05 265 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CATSPER4Q7RTX7 472 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 TMCO2Q7Z6W1 182 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 DAAM2Q86T65 1068 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 NT5DC3Q86UY8 548 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PALB2Q86YC2 1186 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 EFCAB13Q8IY85 973 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MCOLN2Q8IZK6 566 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 RASGEF1CQ8N431 466 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 EIF1ADQ8N9N8 165 aaKnown RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SPATA4Q8NEY3 305 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 COG1Q8WTW3 980 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SLC20A1Q8WUM9 679 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 ZNF606Q8WXB4 792 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 SCLT1Q96NL6 688 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MMS19Q96T76 1030 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 NAP1L3Q99457 506 aaPredicted RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 C17orf80Q9BSJ5 609 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 TRAIPQ9BWF2 469 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 PARD6BQ9BYG5 372 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CELF4Q9BZC1 486 aaKnown RBP5.76□□□□□ -1.49
COL17A1-206ENST00000483876 MTMR12Q9C0I1 747 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 THAP2Q9H0W7 228 aa5.76□□□□□ -1.49
COL17A1-206ENST00000483876 CARD9Q9H257 536 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms