RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 PCDHB5Q9Y5E4 795 aa28.33■■■□□ 2.13
GTF3C4-202ENST00000483873 RHOP08100 348 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 GBP2P32456 591 aaPredicted RBP28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 ASPAP45381 313 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 SMARCB1Q12824 385 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 NFE2Q16621 373 aaPredicted RBP28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 OTOP3Q7RTS5 596 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 HS6ST3Q8IZP7 471 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 IMPG2Q9BZV3 1241 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 HSFX1Q9UBD0 423 aa28.32■■■□□ 2.12
GTF3C4-202ENST00000483873 FAM163BP0C2L3 166 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 HAPLN1P10915 354 aaPredicted RBP28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 PTPN2P17706 415 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 ATF6P18850 670 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 ALDH1A3P47895 512 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 SLC5A9Q2M3M2 681 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 CCDC183Q5T5S1 534 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 CAVIN1Q6NZI2 390 aaKnown RBP28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 FAM171BQ6P995 826 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 FBXL13Q8NEE6 735 aa28.31■■■□□ 2.12
GTF3C4-202ENST00000483873 A8MXQ7 604 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 NRG2O14511 850 aaPredicted RBP28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 P4HA1P13674 534 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 ELMOD1Q8N336 334 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 MYLPFQ96A32 169 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 ACSF2Q96CM8 615 aaPredicted RBP28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 ZNF512Q96ME7 567 aaPredicted RBP28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 RAB20Q9NX57 234 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 MUTYHQ9UIF7 546 aa28.3■■■□□ 2.12
GTF3C4-202ENST00000483873 CYP2F1P24903 491 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 TUFMP49411 452 aaKnown RBP28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 GPR15P49685 360 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 EPHB3P54753 998 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 PLD1Q13393 1074 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 TRIM59Q8IWR1 403 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 ZDHHC14Q8IZN3 488 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 ING5Q8WYH8 240 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 TCEAL4Q96EI5 215 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 BCO2Q9BYV7 579 aa28.29■■■□□ 2.12
GTF3C4-202ENST00000483873 GNA14O95837 355 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 CCR2P41597 374 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 FMO5P49326 533 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 MARSP56192 900 aaKnown RBP28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 MDH1BQ5I0G3 518 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 IQCEQ6IPM2 695 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 SPATA2LQ8IUW3 424 aaPredicted RBP28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 NIF3L1Q9GZT8 377 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 LIMD1Q9UGP4 676 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 HMGXB4Q9UGU5 601 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 COQ4Q9Y3A0 265 aa28.28■■■□□ 2.12
GTF3C4-202ENST00000483873 GREB1Q4ZG55 1949 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 ASGR2P07307 311 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 PTPN1P18031 435 aaKnown RBP28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 ORC1Q13415 861 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 SKOR2Q2VWA4 1001 aaPredicted RBP28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 PRSS36Q5K4E3 855 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 SDHAF4Q5VUM1 108 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 PLCD3Q8N3E9 789 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 CCDC150Q8NCX0 1101 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 STKLD1Q8NE28 680 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 MYCBPAPQ8TBZ2 947 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 GPR152Q8TDT2 470 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 GIPC2Q8TF65 315 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 PCED1BQ96HM7 432 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 CNOT6LQ96LI5 555 aaKnown RBP28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 MRPS23Q9Y3D9 190 aaKnown RBP28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 TRIOO75962 3097 aa28.27■■■□□ 2.12
GTF3C4-202ENST00000483873 FGFR1OPO95684 399 aaKnown RBP28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 CEBPBP17676 345 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 POTEHQ6S545 545 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 TMC8Q8IU68 726 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 IRF2BP1Q8IU81 584 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 B3GALNT2Q8NCR0 500 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 FAM200AQ8TCP9 573 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 FGF13Q92913 245 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 TATDN2Q93075 761 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 PSMG2Q969U7 264 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 LRRC3Q9BY71 257 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 ZNF334Q9HCZ1 680 aaPredicted RBP28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 ABCB6Q9NP58 842 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 AVENQ9NQS1 362 aaPredicted RBP28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 ASAH2Q9NR71 780 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 DACH1Q9UI36 760 aa28.26■■■□□ 2.12
GTF3C4-202ENST00000483873 MYL4P12829 197 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 NDST1P52848 882 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 EPHA5P54756 1037 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 CYP27A1Q02318 531 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 CFAP221Q4G0U5 840 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 C4orf50Q6ZRC1 276 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 PDZD4Q76G19 769 aaPredicted RBP28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 DNAJB7Q7Z6W7 309 aaPredicted RBP28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 NPAS3Q8IXF0 933 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 ST13P5Q8NFI4 369 aaPredicted RBP28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 EPS15L1Q9UBC2 864 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 OBSL1O75147 1896 aa28.26■■■□□ 2.11
GTF3C4-202ENST00000483873 DENND4CQ5VZ89 1909 aa28.25■■■□□ 2.11
GTF3C4-202ENST00000483873 CCDC192P0DO97 292 aa28.25■■■□□ 2.11
GTF3C4-202ENST00000483873 LAMP2P13473 410 aa28.25■■■□□ 2.11
GTF3C4-202ENST00000483873 GJA1P17302 382 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms