RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 GPD2P43304 727 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 GABRB2P47870 512 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 ARHGAP17Q68EM7 881 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 DNAJC24Q6P3W2 148 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 C18orf8Q96DM3 657 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 BTBD6Q96KE9 485 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 OSBPL7Q9BZF2 842 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 UNC93B1Q9H1C4 597 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 RSAD1Q9HA92 442 aa27.77■■■□□ 2.04
SHOX2-204ENST00000483851 TMEM191CA6NGB0 347 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 SPTLC1O15269 473 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 ZNF268Q14587 947 aaPredicted RBP27.76■■■□□ 2.04
SHOX2-204ENST00000483851 C2CD6Q53TS8 623 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 OR6B3Q8NGW1 331 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 ALG3Q92685 438 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 PLVAPQ9BX97 442 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 GOLGA2P5Q9HBQ8 144 aa27.76■■■□□ 2.04
SHOX2-204ENST00000483851 RBM12Q9NTZ6 932 aaKnown RBP27.76■■■□□ 2.04
SHOX2-204ENST00000483851 MEIS3P2A8K0S8 358 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 M0QYV0 167 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 INPPL1O15357 1258 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 ORC1Q13415 861 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 PTPN20Q4JDL3 420 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 PPP1R15BQ5SWA1 713 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 KBTBD7Q8WVZ9 684 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 RGS18Q9NS28 235 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 RNF19AQ9NV58 838 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 SMARCAL1Q9NZC9 954 aa27.76■■■□□ 2.03
SHOX2-204ENST00000483851 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.76■■■□□ 2.03
SHOX2-204ENST00000483851 A8MXQ7 604 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 HSPA6P17066 643 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 WARSP23381 471 aaKnown RBP27.75■■■□□ 2.03
SHOX2-204ENST00000483851 GNL1P36915 607 aaPredicted RBP27.75■■■□□ 2.03
SHOX2-204ENST00000483851 PPP2R5EQ16537 467 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 DCAF12L1Q5VU92 463 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 RNPC3Q96LT9 517 aaKnown RBP27.75■■■□□ 2.03
SHOX2-204ENST00000483851 SNX25Q9H3E2 840 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 TSPAN16Q9UKR8 245 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 OGDHLQ9ULD0 1010 aa27.75■■■□□ 2.03
SHOX2-204ENST00000483851 RWDD2BP57060 319 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 BFSP2Q13515 415 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 CASP8Q14790 479 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 LPPQ93052 612 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 DDX27Q96GQ7 796 aaKnown RBP27.74■■■□□ 2.03
SHOX2-204ENST00000483851 TNIP3Q96KP6 325 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 FTHL17Q9BXU8 183 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 SIGLEC16A6NMB1 481 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 EOMESO95936 686 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 OAS2P29728 719 aaKnown RBP27.74■■■□□ 2.03
SHOX2-204ENST00000483851 SNX16P57768 344 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 PDCLQ13371 301 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 ZNF598Q86UK7 904 aaKnown RBP27.74■■■□□ 2.03
SHOX2-204ENST00000483851 ECHDC2Q86YB7 292 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 STK32AQ8WU08 396 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 KRT35Q92764 455 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 RNF216Q9NWF9 866 aaPredicted RBP27.74■■■□□ 2.03
SHOX2-204ENST00000483851 CYTH4Q9UIA0 394 aa27.74■■■□□ 2.03
SHOX2-204ENST00000483851 SELPP16109 830 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 GRIK3Q13003 919 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 PKDCCQ504Y2 493 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 LLGL2Q6P1M3 1020 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 DCUN1D2Q6PH85 259 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 CCNI2Q6ZMN8 369 aaPredicted RBP27.73■■■□□ 2.03
SHOX2-204ENST00000483851 ACOT1Q86TX2 421 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 FAM126BQ8IXS8 530 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 ADGRF2Q8IZF7 708 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 IPO4Q8TEX9 1081 aaKnown RBP27.73■■■□□ 2.03
SHOX2-204ENST00000483851 FNIP1Q8TF40 1166 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 CPXM1Q96SM3 734 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 MIOSQ9NXC5 875 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 HESX1Q9UBX0 185 aa27.73■■■□□ 2.03
SHOX2-204ENST00000483851 PSTPIP1O43586 416 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 PIGHQ14442 188 aaPredicted RBP27.72■■■□□ 2.03
SHOX2-204ENST00000483851 SEL1L2Q5TEA6 688 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 PHLDB2Q86SQ0 1253 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 TMEM86AQ8N2M4 240 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 NIPA2Q8N8Q9 360 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 UROC1Q96N76 676 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 TRIM7Q9C029 511 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 SYNCQ9H7C4 482 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 NME7Q9Y5B8 376 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 H3BQF6 201 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 FGGP02679 453 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 SCNN1GP51170 649 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 PPP1R26Q5T8A7 1209 aaPredicted RBP27.72■■■□□ 2.03
SHOX2-204ENST00000483851 C8orf74Q6P047 294 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 SLC24A5Q71RS6 500 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 LRRC8DQ7L1W4 858 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 SPATA18Q8TC71 538 aa27.72■■■□□ 2.03
SHOX2-204ENST00000483851 KRIT1O00522 736 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 PODXLO00592 558 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 CYB561D2O14569 222 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 PSMC1P62191 440 aaKnown RBP27.71■■■□□ 2.03
SHOX2-204ENST00000483851 MBTPS1Q14703 1052 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 GOLGA7BQ2TAP0 167 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 XYLT1Q86Y38 959 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 RHOT1Q8IXI2 618 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 C12orf29Q8N999 325 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 MCRS1Q96EZ8 462 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 VIPAS39Q9H9C1 493 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms