RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IP6K2Q9UHH9 426 aa14.87□□□□□ -0.03
CLK3-204ENST00000483723 DNM1LO00429 736 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 ZRANB2O95218 330 aaKnown RBP eCLIP14.86□□□□□ -0.03
CLK3-204ENST00000483723 WARSP23381 471 aaKnown RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 RPL9P32969 192 aaKnown RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 GNL1P36915 607 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 RPL7AP62424 266 aaKnown RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 VSNL1P62760 191 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 MBTPS1Q14703 1052 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 CCDC70Q6NSX1 233 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 ACOT1Q86TX2 421 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 RTN4RL1Q86UN2 441 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 OR6B3Q8NGW1 331 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 MCRS1Q96EZ8 462 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 RGS18Q9NS28 235 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 TSPAN16Q9UKR8 245 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 L1RE1Q9UN81 338 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 PCNTO95613 3336 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 KBTBD13C9JR72 458 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 M0QYV0 167 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 SETSIPP0DME0 302 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 MCM3P25205 808 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 CTCFP49711 727 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 RWDD2BP57060 319 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 FAM189BP81408 668 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 PDCLQ13371 301 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 PPP1R26Q5T8A7 1209 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 CC2D1AQ6P1N0 951 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 DNAJC24Q6P3W2 148 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 XYLT1Q86Y38 959 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 ECHDC2Q86YB7 292 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 NIPA2Q8N8Q9 360 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 APPL2Q8NEU8 664 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 FNIP1Q8TF40 1166 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 NAP1L3Q99457 506 aaPredicted RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 RSAD1Q9HA92 442 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 ZNF446Q9NWS9 450 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 DMGDHQ9UI17 866 aaKnown RBP14.86□□□□□ -0.03
CLK3-204ENST00000483723 OGDHLQ9ULD0 1010 aa14.86□□□□□ -0.03
CLK3-204ENST00000483723 A8MXQ7 604 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 C9IYK1 514 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 BHMG1C9JSJ3 638 aaPredicted RBP14.85□□□□□ -0.03
CLK3-204ENST00000483723 GABRDO14764 452 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 HUS1O60921 280 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 CAPN15O75808 1086 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 GJB6O95452 261 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 FGGP02679 453 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 ERBB2P04626 1255 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 PYGMP11217 842 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 ZNF252P-AS1Q0IIN9 211 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 ZNF211Q13398 564 aaPredicted RBP14.85□□□□□ -0.03
CLK3-204ENST00000483723 COL13A1Q5TAT6 717 aaPredicted RBP14.85□□□□□ -0.03
CLK3-204ENST00000483723 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.85□□□□□ -0.03
CLK3-204ENST00000483723 UBA3Q8TBC4 463 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 STK32AQ8WU08 396 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 HDAC7Q8WUI4 952 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 DDX27Q96GQ7 796 aaKnown RBP14.85□□□□□ -0.03
CLK3-204ENST00000483723 TJP2Q9UDY2 1190 aa14.85□□□□□ -0.03
CLK3-204ENST00000483723 KRIT1O00522 736 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 PSTPIP1O43586 416 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 EOMESO95936 686 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 PAX3P23760 479 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 IGFBP6P24592 240 aaPredicted RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 LMO2P25791 158 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 RPL34P49207 117 aaKnown RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 AARSP49588 968 aaKnown RBP eCLIP14.84□□□□□ -0.03
CLK3-204ENST00000483723 SCNN1GP51170 649 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 PSMC1P62191 440 aaKnown RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 OGDHQ02218 1023 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 PIGHQ14442 188 aaPredicted RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 PPP2R5EQ16537 467 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 LONRF2Q1L5Z9 754 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 TMCO3Q6UWJ1 677 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 CCNI2Q6ZMN8 369 aaPredicted RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 OSTM1Q86WC4 334 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 FAM126BQ8IXS8 530 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 KRT12Q99456 494 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 BEGAINQ9BUH8 593 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 DNAI2Q9GZS0 605 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 MIS12Q9H081 205 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 SNX25Q9H3E2 840 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 DPEP3Q9H4B8 488 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 NR2E1Q9Y466 385 aa14.84□□□□□ -0.03
CLK3-204ENST00000483723 TDRD15B5MCY1 1934 aaKnown RBP14.84□□□□□ -0.03
CLK3-204ENST00000483723 CYB561D2O14569 222 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 ATP8B1O43520 1251 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 KRT3P12035 628 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 TAS2R40P59535 323 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 UPP1Q16831 310 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 GOLGA7BQ2TAP0 167 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 BEND6Q5SZJ8 279 aaPredicted RBP14.83□□□□□ -0.03
CLK3-204ENST00000483723 LRRC38Q5VT99 294 aa14.83□□□□□ -0.03
CLK3-204ENST00000483723 C8orf74Q6P047 294 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms