RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 DOCK6Q96HP0 2047 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 A8MXQ7 604 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 WEE2P0C1S8 567 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 HAPLN1P10915 354 aaPredicted RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 ACAT1P24752 427 aaKnown RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 LMO2P25791 158 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 MAGEA11P43364 429 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 INCA1Q0VD86 236 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 TWF1Q12792 350 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 VEPH1Q14D04 833 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 ITIH5Q86UX2 942 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 SPATA2LQ8IUW3 424 aaPredicted RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 TDRD5Q8NAT2 981 aaKnown RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 MYCBPAPQ8TBZ2 947 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 ENOX1Q8TC92 643 aaKnown RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 NOTCH4Q99466 2003 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 PI4K2AQ9BTU6 479 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 ABI2Q9NYB9 513 aaPredicted RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 MAGEC2Q9UBF1 373 aaPredicted RBP16.66■□□□□ 0.26
RPP40-206ENST00000483546 GTF3C4Q9UKN8 822 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 DOCK8Q8NF50 2099 aa16.66■□□□□ 0.26
RPP40-206ENST00000483546 ZNF197O14709 1029 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 MICAL2O94851 1124 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 FGF19O95750 216 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 EPHA5P54756 1037 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 YWHAEP62258 255 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 RPL10AP62906 217 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 MGAT5BQ3V5L5 792 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 PABPC1LQ4VXU2 614 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 CAVIN1Q6NZI2 390 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 VSTM1Q6UX27 236 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 SCARA5Q6ZMJ2 495 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 GRASPQ7Z6J2 395 aaPredicted RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 ZDHHC14Q8IZN3 488 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 SEMA4DQ92854 862 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 RPGRIP1Q96KN7 1286 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 CRISPLD1Q9H336 500 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 CRTAC1Q9NQ79 661 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 DNMT3BQ9UBC3 853 aaKnown RBP16.65■□□□□ 0.26
RPP40-206ENST00000483546 CDH22Q9UJ99 828 aa16.65■□□□□ 0.26
RPP40-206ENST00000483546 TTC28Q96AY4 2481 aa16.64■□□□□ 0.26
RPP40-206ENST00000483546 MYBPHLA2RUH7 354 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 PDGFRBP09619 1106 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
RPP40-206ENST00000483546 FSHRP23945 695 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 TBXAS1P24557 533 aaPredicted RBP16.64■□□□□ 0.25
RPP40-206ENST00000483546 CDH8P55286 799 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 CYP4A22Q5TCH4 519 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 IRF2BP1Q8IU81 584 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 B3GALNT2Q8NCR0 500 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 PSMG2Q969U7 264 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 SEPT5Q99719 369 aaPredicted RBP16.64■□□□□ 0.25
RPP40-206ENST00000483546 SDCBP2Q9H190 292 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 ASAH2Q9NR71 780 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 TMLHEQ9NVH6 421 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 SLC27A5Q9Y2P5 690 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
RPP40-206ENST00000483546 GTPBP10A4D1E9 387 aaKnown RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 RHOP08100 348 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 EEF1GP26641 437 aaKnown RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 MTIF2P46199 727 aaKnown RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 RAP1GAPP47736 663 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 PSMC1P62191 440 aaKnown RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 TYRO3Q06418 890 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 SMYD5Q6GMV2 418 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 PDZD4Q76G19 769 aaPredicted RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 MYLPFQ96A32 169 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 PCED1BQ96HM7 432 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 NT5C1BQ96P26 610 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 NECAB3Q96P71 396 aaPredicted RBP16.63■□□□□ 0.25
RPP40-206ENST00000483546 NT5C1AQ9BXI3 368 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 ELOVL4Q9GZR5 314 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 CEP72Q9P209 647 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 EPS15L1Q9UBC2 864 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 NFE2L3Q9Y4A8 694 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
RPP40-206ENST00000483546 C5orf42Q9H799 3197 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 C2CD4DB7Z1M9 353 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 TNFRSF10AO00220 468 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 TRIM66O15016 1216 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 HCRTO43612 131 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 ATP2C2O75185 946 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 CILPO75339 1184 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 ATF6P18850 670 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 NDST1P52848 882 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 CUL2Q13617 745 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 MDH1BQ5I0G3 518 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 CREBRFQ8IUR6 639 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 TTC9BQ8N6N2 239 aa16.62■□□□□ 0.25
RPP40-206ENST00000483546 FEZF2Q8TBJ5 459 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms