RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 FILIP1Q7Z7B0 1213 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 TMC8Q8IU68 726 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 UBALD2Q8IYN6 164 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 TAS1R2Q8TE23 839 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 SMYD3Q9H7B4 428 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 KCNK12Q9HB15 430 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 CRTAC1Q9NQ79 661 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 ASAH2Q9NR71 780 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 ABI2Q9NYB9 513 aaPredicted RBP19.25■□□□□ 0.67
HDAC6-225ENST00000483506 GDE1Q9NZC3 331 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 NXF1Q9UBU9 619 aaKnown RBP19.25■□□□□ 0.67
HDAC6-225ENST00000483506 GTF3C4Q9UKN8 822 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 CTNND2Q9UQB3 1225 aa19.25■□□□□ 0.67
HDAC6-225ENST00000483506 MYBPHLA2RUH7 354 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MOSPD3O75425 235 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 P4HA1P13674 534 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 CCR2P41597 374 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MAGEA11P43364 429 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MTMR3Q13615 1198 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 HTR4Q13639 388 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MAPRE1Q15691 268 aaKnown RBP19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MGAT5BQ3V5L5 792 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 CYP4A22Q5TCH4 519 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 PDZD4Q76G19 769 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-225ENST00000483506 FRMD5Q7Z6J6 570 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 ITIH5Q86UX2 942 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 HS6ST3Q8IZP7 471 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 MYCBPAPQ8TBZ2 947 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 FAXDC2Q96IV6 333 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 SEPT5Q99719 369 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-225ENST00000483506 BCO2Q9BYV7 579 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 SNX25Q9H3E2 840 aa19.24■□□□□ 0.67
HDAC6-225ENST00000483506 METTL14Q9HCE5 456 aaKnown RBP19.24■□□□□ 0.67
HDAC6-225ENST00000483506 ARMCX3Q9UH62 379 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-225ENST00000483506 ATP2C2O75185 946 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 SOAT2O75908 522 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 CEBPBP17676 345 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 ASPAP45381 313 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 MXI1P50539 228 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 CCDC142Q17RM4 750 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 POTEHQ6S545 545 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 C4orf50Q6ZRC1 276 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 DNAJB7Q7Z6W7 309 aaPredicted RBP19.23■□□□□ 0.67
HDAC6-225ENST00000483506 OR6B3Q8NGW1 331 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 SLC35C1Q96A29 364 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 TCEAL4Q96EI5 215 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 SDCBP2Q9H190 292 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 NUP62CLQ9H1M0 184 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 COQ4Q9Y3A0 265 aa19.23■□□□□ 0.67
HDAC6-225ENST00000483506 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 NRG2O14511 850 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 FGF19O95750 216 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 PDGFRBP09619 1106 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 MARSP56192 900 aaKnown RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 PSMC1P62191 440 aaKnown RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 NOP14P78316 857 aaKnown RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 SIGLEC14Q08ET2 396 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 TDGQ13569 410 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 VEPH1Q14D04 833 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 SPOPLQ6IQ16 392 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 MTSS1LQ765P7 747 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 SPATA2LQ8IUW3 424 aaPredicted RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 MLKLQ8NB16 471 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 MYLPFQ96A32 169 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 LPIN3Q9BQK8 851 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 PI4K2AQ9BTU6 479 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 IMPG2Q9BZV3 1241 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 APOBEC3GQ9HC16 384 aaKnown RBP19.22■□□□□ 0.67
HDAC6-225ENST00000483506 RWDD2AQ9UIY3 292 aa19.22■□□□□ 0.67
HDAC6-225ENST00000483506 PMM2O15305 246 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 CYP2F1P24903 491 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 CDH8P55286 799 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 RPL10AP62906 217 aaKnown RBP19.21■□□□□ 0.67
HDAC6-225ENST00000483506 INCA1Q0VD86 236 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 TMEM31Q5JXX7 168 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 VSTM1Q6UX27 236 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 TRIM67Q6ZTA4 783 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 UNC93AQ86WB7 457 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 FBXL13Q8NEE6 735 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 SHKBP1Q8TBC3 707 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 GPT2Q8TD30 523 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 ING5Q8WYH8 240 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 SEMA4DQ92854 862 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 ELMO3Q96BJ8 720 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 PCED1BQ96HM7 432 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 CEP295NLQ96MC4 621 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 NIF3L1Q9GZT8 377 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 DPEP3Q9H4B8 488 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 CYP3A43Q9HB55 503 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 ZNF334Q9HCZ1 680 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-225ENST00000483506 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
HDAC6-225ENST00000483506 DUSP12Q9UNI6 340 aa19.21■□□□□ 0.67
HDAC6-225ENST00000483506 GREB1Q4ZG55 1949 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 A8MXQ7 604 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 PRR33A8MZF0 331 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 GNA14O95837 355 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 MYL4P12829 197 aa19.2■□□□□ 0.66
HDAC6-225ENST00000483506 HMGA1P17096 107 aaKnown RBP19.2■□□□□ 0.66
HDAC6-225ENST00000483506 PTPN1P18031 435 aaKnown RBP19.2■□□□□ 0.66
HDAC6-225ENST00000483506 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms