RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 FAM207AQ9NSI2 230 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 CLIC5Q9NZA1 410 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.32□□□□□ -1.08
SNX13-208ENST00000482558 PGAP2Q9UHJ9 254 aa8.32□□□□□ -1.08
SNX13-208ENST00000482558 EVLQ9UI08 416 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 DBR1Q9UK59 544 aaKnown RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 REXO2Q9Y3B8 237 aaKnown RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 V9GYY5 206 aaPredicted RBP8.32□□□□□ -1.08
SNX13-208ENST00000482558 RPTORQ8N122 1335 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 LRRC53A6NM62 1247 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 IPO5O00410 1097 aaKnown RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 WNT10BO00744 389 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 MAPK13O15264 365 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 N4BP1O75113 896 aaKnown RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 STAM2O75886 525 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 NR3C1P04150 777 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 PGRP06401 933 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 HOXA13P31271 388 aaPredicted RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 SFNP31947 248 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 L1CAMP32004 1257 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ECE1P42892 770 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 JAK3P52333 1124 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 CLCQ05315 142 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 CXCL9Q07325 125 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 CETN1Q12798 172 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 RRP1BQ14684 758 aaKnown RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 PLCL1Q15111 1095 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ASIC2Q16515 512 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 EXOC3L4Q17RC7 722 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ASTE1Q2TB18 679 aaPredicted RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 ZNF792Q3KQV3 632 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 WIPI1Q5MNZ9 446 aaPredicted RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 B3GNT9Q6UX72 402 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 C1orf186Q6ZWK4 172 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 HDXQ7Z353 690 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ZNF572Q7Z3I7 529 aaPredicted RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 REC114Q7Z4M0 266 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 SFR1Q86XK3 245 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 TPH2Q8IWU9 490 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 LMBR1Q8WVP7 490 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 HPS3Q969F9 1004 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 MISP3Q96FF7 219 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 PARD6BQ9BYG5 372 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 KRTAP4-11Q9BYQ6 195 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 TRIM8Q9BZR9 551 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 RAD18Q9NS91 495 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 LARSQ9P2J5 1176 aaKnown RBP8.31□□□□□ -1.08
SNX13-208ENST00000482558 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 CCPG1Q9ULG6 757 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ACTL7BQ9Y614 415 aa8.31□□□□□ -1.08
SNX13-208ENST00000482558 ARHGEF35A5YM69 484 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 C19orf81C9J6K1 198 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 CES2O00748 559 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 P4HA2O15460 535 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 ZNF862O60290 1169 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 HIP1RO75146 1068 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 FLOT1O75955 427 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 GCNT3O95395 438 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 NFICP08651 508 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 PNMA6AP0CW24 399 aaPredicted RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 FERP16591 822 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 PRKCIP41743 596 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 PAFAH1B1P43034 410 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 GJA9P57773 515 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 CBX1P83916 185 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 ENPEPQ07075 957 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 CLUL1Q15846 466 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 SLC18A3Q16572 532 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 SLC10A6Q3KNW5 377 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 GLE1Q53GS7 698 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 TDRD12Q587J7 1177 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 ZNF720Q7Z2F6 126 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 MIER3Q7Z3K6 550 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 USP37Q86T82 979 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 WFDC3Q8IUB2 231 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 APOBEC3FQ8IUX4 373 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 NELFCDQ8IXH7 590 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 C12orf56Q8IXR9 622 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 MYCT1Q8N699 235 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 CAGE1Q8TC20 777 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 ELMO3Q96BJ8 720 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 HVCN1Q96D96 273 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 CDHR1Q96JP9 859 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 EXOC2Q96KP1 924 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 TNIP3Q96KP6 325 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 SPAG5Q96R06 1193 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 P2RX7Q99572 595 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 CDC6Q99741 560 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 LSM14BQ9BX40 385 aaKnown RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 ZNF341Q9BYN7 854 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 TMEM39BQ9GZU3 492 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 SEMA6CQ9H3T2 930 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 ST6GALNAC4Q9H4F1 302 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms