RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 APRTP07741 180 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ATP6V1C1P21283 382 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 FAAP100Q0VG06 881 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 CUL2Q13617 745 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 NCOA4Q13772 614 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 RASA2Q15283 850 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 GRAMD1BQ3KR37 738 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ZBTB41Q5SVQ8 909 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 RHBDF2Q6PJF5 856 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 SPOCD1Q6ZMY3 1216 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 RCOR2Q8IZ40 523 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 CRYGNQ8WXF5 182 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 ATXN7L3BQ96GX2 97 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 APOL6Q9BWW8 343 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 CADM1Q9BY67 442 aaKnown RBP13.34□□□□□ -0.27
VPS52-218ENST00000482399 RAB6BQ9NRW1 208 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 PCMTD2Q9NV79 361 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 PACSIN3Q9UKS6 424 aa13.34□□□□□ -0.27
VPS52-218ENST00000482399 PLIN4Q96Q06 1357 aa13.33□□□□□ -0.27
VPS52-218ENST00000482399 IQANK1A0A1B0GTG1 560 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 RNF8O76064 485 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 SLC27A3Q5K4L6 730 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 IZUMO2Q6UXV1 221 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 EXD1Q8NHP7 514 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 NGRNQ9NPE2 291 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 SENP1Q9P0U3 644 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 PRKAG3Q9UGI9 489 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 NPR1P16066 1061 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 ELK3P41970 407 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 BAATQ14032 418 aaPredicted RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 KBTBD12Q3ZCT8 623 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 PRPF39Q86UA1 669 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 NUDCD3Q8IVD9 361 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 LARGE2Q8N3Y3 721 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 TMEM35BQ8NCS4 154 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 SPATA18Q8TC71 538 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 ZNF606Q8WXB4 792 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 PTPRN2Q92932 1015 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 IRAK4Q9NWZ3 460 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 ANKRD36CQ5JPF3 1778 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 BHMG1C9JSJ3 638 aaPredicted RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 H0YIN7 160 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 POLRMTO00411 1230 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 SAT1P21673 171 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 GPC3P51654 580 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 HIRAP54198 1017 aaPredicted RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 HADHBP55084 474 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 GDF10P55107 478 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 GTF2BQ00403 316 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 KRT81Q14533 505 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 CHI3L2Q15782 390 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 TEX9Q8N6V9 391 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 WDR60Q8WVS4 1066 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 SLC7A6OSQ96CW6 309 aaPredicted RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 NMUR2Q9GZQ4 415 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 RANBP17Q9H2T7 1088 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 AGO4Q9HCK5 861 aaKnown RBP13.33□□□□□ -0.28
VPS52-218ENST00000482399 NDE1Q9NXR1 346 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 FBXO40Q9UH90 709 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 PCDHA10Q9Y5I2 948 aa13.33□□□□□ -0.28
VPS52-218ENST00000482399 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 STK10O94804 968 aaKnown RBP13.32□□□□□ -0.28
VPS52-218ENST00000482399 LMNAP02545 664 aaKnown RBP13.32□□□□□ -0.28
VPS52-218ENST00000482399 RANBP1P43487 201 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 KLHL38Q2WGJ6 581 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 CRY2Q49AN0 593 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 PLEKHG4Q58EX7 1191 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 FNBP1LQ5T0N5 605 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 C4orf50Q6ZRC1 276 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 ABRAQ8N0Z2 381 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 MTBPQ96DY7 904 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 GINS2Q9Y248 185 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 ASTN2O75129 1339 aaPredicted RBP13.32□□□□□ -0.28
VPS52-218ENST00000482399 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 KRT3P12035 628 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 VCPP55072 806 aaKnown RBP13.32□□□□□ -0.28
VPS52-218ENST00000482399 SPP2Q13103 211 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 SGSM1Q2NKQ1 1148 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 TFDP3Q5H9I0 405 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
VPS52-218ENST00000482399 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
VPS52-218ENST00000482399 RIBC1Q8N443 379 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms