RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 CCDC62Q6P9F0 684 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 NPNTQ6UXI9 565 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 BMP8AQ7Z5Y6 402 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 HERC6Q8IVU3 1022 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 REPS2Q8NFH8 660 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 NEDD1Q8NHV4 660 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 AUTS2Q8WXX7 1259 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 UTP4Q969X6 686 aaKnown RBP8.42□□□□□ -1.06
LINC00888-203ENST00000482098 DDX11Q96FC9 970 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 HEXIM2Q96MH2 286 aaKnown RBP8.42□□□□□ -1.06
LINC00888-203ENST00000482098 RIPOR3Q96MK2 946 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 TEX13BQ9BXU2 312 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 UPF3BQ9BZI7 483 aaKnown RBP8.42□□□□□ -1.06
LINC00888-203ENST00000482098 WDR12Q9GZL7 423 aaKnown RBP8.42□□□□□ -1.06
LINC00888-203ENST00000482098 DIAPH3Q9NSV4 1193 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 MARCH2Q9P0N8 246 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 Q9Y3F1 56 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 UMODL1Q5DID0 1318 aa8.42□□□□□ -1.06
LINC00888-203ENST00000482098 RIF1Q5UIP0 2472 aaKnown RBP8.42□□□□□ -1.06
LINC00888-203ENST00000482098 ZNF536O15090 1300 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 RAD50Q92878 1312 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 ZNF532Q9HCE3 1301 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 PRRT4C9JH25 899 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 RNF113AO15541 343 aaKnown RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CHGBP05060 677 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 ZFYP08048 801 aaPredicted RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CLEC2LP0C7M8 214 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CHMLP26374 656 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 MANFP55145 182 aaKnown RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 DYNLL1P63167 89 aaKnown RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CYP27C1Q4G0S4 372 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 KIAA1755Q5JYT7 1200 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 SLC9C2Q5TAH2 1124 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 HLA-DQA1Q5Y7H0 255 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 KRT40Q6A162 431 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 ZSCAN25Q6NSZ9 544 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CASC1Q6TDU7 716 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 SIAH1Q8IUQ4 282 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 Q8N1Y9 231 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 OR2C3Q8N628 320 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 PIP4K2CQ8TBX8 421 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 NEK9Q8TD19 979 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 SH3RF2Q8TEC5 729 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 LRTOMTQ8WZ04 291 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 MYRFLQ96LU7 910 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CCDC17Q96LX7 622 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 UBL7Q96S82 380 aaPredicted RBP8.41□□□□□ -1.06
LINC00888-203ENST00000482098 KCNF1Q9H3M0 494 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 CERS4Q9HA82 394 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 SLC6A20Q9NP91 592 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 FBXO40Q9UH90 709 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 DCHS1Q96JQ0 3298 aa8.41□□□□□ -1.06
LINC00888-203ENST00000482098 GRIN2DO15399 1336 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 A0A0D9SFI3 127 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 C22orf46C9J442 243 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 ADCY6O43306 1168 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 B4GALT4O60513 344 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 TMEM253P0C7T8 217 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 FPR2P25090 351 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 HTR1BP28222 390 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 GJA4P35212 333 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 DDIT3P35638 169 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 GRK6P43250 576 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 BCAR1P56945 870 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 TNFAIP2Q03169 654 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 ICA1Q05084 483 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 UBE3CQ15386 1083 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 CNN3Q15417 329 aaKnown RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 ZMYM1Q5SVZ6 1142 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 TIGD7Q6NT04 549 aaPredicted RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 OGFOD3Q6PK18 319 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 SHISA2Q6UWI4 295 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 CXCL17Q6UXB2 119 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 PHYKPLQ8IUZ5 450 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 SLC41A1Q8IVJ1 513 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 TMTC2Q8N394 836 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 MPP4Q96JB8 637 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 FAM227BQ96M60 508 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 KATNBL1Q9H079 304 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 TRPV6Q9H1D0 765 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 VPS11Q9H270 941 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 ALDH8A1Q9H2A2 487 aaPredicted RBP8.4□□□□□ -1.06
LINC00888-203ENST00000482098 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 X6R8D5 127 aa8.4□□□□□ -1.06
LINC00888-203ENST00000482098 DMDP11532 3685 aa8.4□□□□□ -1.07
LINC00888-203ENST00000482098 GNB5O14775 395 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 MAFKO60675 156 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 HSD3B1P14060 373 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 KCNA5P22460 613 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 CHKAP35790 457 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 IL12RB1P42701 662 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 ZP2Q05996 745 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 DUSP4Q13115 394 aa8.39□□□□□ -1.07
LINC00888-203ENST00000482098 MUM1Q2TAK8 710 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms