RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 LHX5Q9H2C1 402 aa8.47□□□□□ -1.05
MECP2-208ENST00000481807 ERVK-5Q9HDB9 667 aa8.47□□□□□ -1.05
MECP2-208ENST00000481807 AGAP1Q9UPQ3 857 aa8.47□□□□□ -1.05
MECP2-208ENST00000481807 RIF1Q5UIP0 2472 aaKnown RBP8.47□□□□□ -1.05
MECP2-208ENST00000481807 PDCD11Q14690 1871 aaKnown RBP8.47□□□□□ -1.05
MECP2-208ENST00000481807 SMIM28A0A1B0GU29 152 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 A0A1W2PQ45 241 aaPredicted RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 A0A1W2PQY0 241 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 DCDC2CA8MYV0 355 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 PIRO00625 290 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 MED7O43513 233 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 PQBP1O60828 265 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 CLSTN1O94985 981 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 WEE2P0C1S8 567 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 FAM163BP0C2L3 166 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 MMP8P22894 467 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 THPOP40225 353 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 NSFP46459 744 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 RAD23BP54727 409 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 TNNC1P63316 161 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 DSC3Q14574 896 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 STILQ15468 1287 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 ELF2Q15723 593 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 ERCC6LQ2NKX8 1250 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 CFAP221Q4G0U5 840 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 LIN9Q5TKA1 542 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 LIMS2Q7Z4I7 341 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 MRPL10Q7Z7H8 261 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 DAAM2Q86T65 1068 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 DNAAF5Q86Y56 855 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 SLC4A11Q8NBS3 891 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 TMEM35BQ8NCS4 154 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 ZNF564Q8TBZ8 553 aaPredicted RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 WHAMMQ8TF30 809 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 COG1Q8WTW3 980 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 ZNF653Q96CK0 615 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 ZNF560Q96MR9 790 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 SDCBP2Q9H190 292 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 MTIF3Q9H2K0 278 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 OSGEPQ9NPF4 335 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 FAM105AQ9NUU6 356 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 GDAP2Q9NXN4 497 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 CTTNBP2NLQ9P2B4 639 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 NXF1Q9UBU9 619 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 AMFRQ9UKV5 643 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 TTC7AQ9ULT0 858 aaPredicted RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 BARX2Q9UMQ3 279 aaPredicted RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 YBX2Q9Y2T7 364 aaKnown RBP8.46□□□□□ -1.06
MECP2-208ENST00000481807 HES2Q9Y543 173 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 CEP83Q9Y592 693 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 MTCH2Q9Y6C9 303 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 GBF1Q92538 1859 aa8.46□□□□□ -1.06
MECP2-208ENST00000481807 EPG5Q9HCE0 2579 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 A0A0U1RQG5 324 aaPredicted RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 ZNF185O15231 689 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 NCK2O43639 380 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 SRGAP2O75044 1071 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CALB1P05937 261 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CTSHP09668 335 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 SKIP12755 728 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 ALADP13716 330 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CD58P19256 250 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 LRPAP1P30533 357 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 PAFAH1B1P43034 410 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 GSCP56915 257 aaPredicted RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 PTP4A2Q12974 167 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 PAK2Q13177 524 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CLUL1Q15846 466 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 TEX35Q5T0J7 233 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 NAA35Q5VZE5 725 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 C9orf57Q5W0N0 161 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 PLEKHA7Q6IQ23 1121 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 SCARA5Q6ZMJ2 495 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 ZNF365Q70YC5 407 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 UNC93AQ86WB7 457 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 RASGEF1CQ8N431 466 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 MSANTD4Q8NCY6 345 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CAGE1Q8TC20 777 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 ACTRT1Q8TDG2 376 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 TFAP2BQ92481 460 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 TSC1Q92574 1164 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 RUBCNQ92622 972 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 HLA-CQ95604 372 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CYFIP2Q96F07 1278 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 TMEM176AQ96HP8 235 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 PPP1R10Q96QC0 940 aaKnown RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 MMS19Q96T76 1030 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 ZSWIM1Q9BR11 485 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 NUP85Q9BW27 656 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 CARD9Q9H257 536 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 PDCL3Q9H2J4 239 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 SMYD3Q9H7B4 428 aa8.45□□□□□ -1.06
MECP2-208ENST00000481807 AGO3Q9H9G7 860 aaKnown RBP8.45□□□□□ -1.06
MECP2-208ENST00000481807 MRPL47Q9HD33 250 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms