RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 DUPD1Q68J44 220 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 SYDE1Q6ZW31 735 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 JAMLQ86YT9 394 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 NIPA2Q8N8Q9 360 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 TRIM6Q9C030 488 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 MIS12Q9H081 205 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 TRPV6Q9H1D0 765 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 ERVK-5Q9HDB9 667 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 DPP3Q9NY33 737 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 VPS18Q9P253 973 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 NR2E1Q9Y466 385 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 TCRBV5S1A1TA0A578 114 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 AGPSO00116 658 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 CD19P15391 556 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 LBX1P52954 281 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 RAD23BP54727 409 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 ZNF394Q53GI3 561 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 CCDC137Q6PK04 289 aaKnown RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 IQCKQ8N0W5 287 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 EXD1Q8NHP7 514 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 FNIP1Q8TF40 1166 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 TMEM176AQ96HP8 235 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
RXRA-202ENST00000481739 POLIQ9UNA4 740 aa16.68■□□□□ 0.26
RXRA-202ENST00000481739 ARVCFO00192 962 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 CHRNA1P02708 482 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 FAM153BP0C7A2 387 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 VDRP11473 427 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 FAM153CQ494X1 144 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 SCARA3Q6AZY7 606 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 DCUN1D2Q6PH85 259 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 LRIG3Q6UXM1 1119 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 RPAINQ86UA6 219 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 FAM228AQ86W67 206 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 LRRC52Q8N7C0 313 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 GRK7Q8WTQ7 553 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 TFAP2BQ92481 460 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 KIF12Q96FN5 646 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 RBM41Q96IZ5 413 aaKnown RBP16.67■□□□□ 0.26
RXRA-202ENST00000481739 SNX27Q96L92 541 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 SENP6Q9GZR1 1112 aaPredicted RBP16.67■□□□□ 0.26
RXRA-202ENST00000481739 FAM153AQ9UHL3 310 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 ADAM21Q9UKJ8 722 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 AGAP1Q9UPQ3 857 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 FAN1Q9Y2M0 1017 aa16.67■□□□□ 0.26
RXRA-202ENST00000481739 DAPK3O43293 454 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 COILP38432 576 aaPredicted RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 DMTNQ08495 405 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 NFX1Q12986 1120 aaKnown RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 SIX1Q15475 284 aaPredicted RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 CNGA2Q16280 664 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 PPP1R15BQ5SWA1 713 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 FBXO46Q6PJ61 603 aaPredicted RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 EIF2AQ9BY44 585 aaKnown RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 TRIM7Q9C029 511 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 RALGAPA2Q2PPJ7 1873 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 XPOTO43592 962 aaKnown RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 RARAP10276 462 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 ATF7P17544 494 aaPredicted RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 PTGIRP43119 386 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 GUCY2FP51841 1108 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 COPS2P61201 443 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 MGAT3Q09327 533 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 SGO2Q562F6 1265 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 AADACL2Q6P093 401 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 ADAT2Q7Z6V5 191 aaKnown RBP16.66■□□□□ 0.26
RXRA-202ENST00000481739 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 SLC43A3Q8NBI5 491 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 SLC4A11Q8NBS3 891 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 C18orf8Q96DM3 657 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 FMO2Q99518 471 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 DNAI2Q9GZS0 605 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 PLEKHA4Q9H4M7 779 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 SMYD3Q9H7B4 428 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 CNTN3Q9P232 1028 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 OGDHLQ9ULD0 1010 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 ST3GAL5Q9UNP4 418 aa16.66■□□□□ 0.26
RXRA-202ENST00000481739 CAPN15O75808 1086 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 ECEL1O95672 775 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 ZNF268Q14587 947 aaPredicted RBP16.65■□□□□ 0.26
RXRA-202ENST00000481739 TWF2Q6IBS0 349 aaKnown RBP16.65■□□□□ 0.26
RXRA-202ENST00000481739 POLNQ7Z5Q5 900 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 RCOR2Q8IZ40 523 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 WDTC1Q8N5D0 677 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 APOL6Q9BWW8 343 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 SDCBP2Q9H190 292 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 DDX56Q9NY93 547 aaKnown RBP16.65■□□□□ 0.26
RXRA-202ENST00000481739 SNTG2Q9NY99 539 aa16.65■□□□□ 0.26
RXRA-202ENST00000481739 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.65■□□□□ 0.262e-6■■■■■ 55.4
RXRA-202ENST00000481739 SIGLEC16A6NMB1 481 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 CD4P01730 458 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 PTPN7P35236 360 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
RXRA-202ENST00000481739 ACAP1Q15027 740 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 TRADDQ15628 312 aa16.64■□□□□ 0.25
RXRA-202ENST00000481739 ZBTB6Q15916 424 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms