RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RGMAQ96B86 450 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 LENG1Q96BZ8 264 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 TSGA13Q96PP4 275 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PABPC3Q9H361 631 aaKnown RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 AKTIPQ9H8T0 292 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 MAFFQ9ULX9 164 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SYNPO2Q9UMS6 1093 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 TBC1D30Q9Y2I9 924 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PRR33A8MZF0 331 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 TMEM233B4DJY2 109 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PI4K2BG5E9Z4 385 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 GOSR1O95249 250 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 MT-ND3P03897 115 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 NFICP08651 508 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SLC12A2P55011 1212 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 NLRP5P59047 1200 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ST5P78524 1137 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CHRNDQ07001 517 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 MALLQ13021 153 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 E2F5Q15329 346 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SH2D3CQ8N5H7 860 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ARL6IP6Q8N6S5 226 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SSH1Q8WYL5 1049 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CFHR4Q92496 578 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CENPTQ96BT3 561 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 FAM46AQ96IP4 442 aaKnown RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 C7orf26Q96N11 449 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 GPATCH2Q9NW75 528 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 NARFQ9UHQ1 456 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ODF2LQ9ULJ1 636 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PCDHA6Q9UN73 950 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 RABL2BQ9UNT1 228 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 C7orf72A4D263 438 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CAMTA2O94983 1202 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 C22orf31O95567 290 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ITGA5P08648 1049 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 BRAFP15056 766 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ITIH2P19823 946 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 BCL6P41182 706 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ZNF131P52739 623 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 FKBP1AP62942 108 aaKnown RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 PPARDQ03181 441 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 KIF22Q14807 665 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 RASA2Q15283 850 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 MFSD4BQ5TF39 518 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CASC1Q6TDU7 716 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ARMC10Q8N2F6 343 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 TTYH1Q9H313 450 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 PNPLA8Q9NP80 782 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PRDM8Q9NQV8 689 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PRSS50Q9UI38 385 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PCDHA3Q9Y5H8 950 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ATRNL1Q5VV63 1379 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 ROCK2O75116 1388 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 FLT1P17948 1338 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 CST5P28325 142 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 SLC7A1P30825 629 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 HPDP32754 393 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 AP1B1Q10567 949 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TARDBPQ13148 414 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC6-208ENST00000481708 CDK5R2Q13319 367 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 LETMD1Q6P1Q0 360 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ZBTB8BQ8NAP8 495 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 CYP2W1Q8TAV3 490 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ZNF566Q969W8 418 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 NSUN4Q96CB9 384 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 RBM18Q96H35 190 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 MAP6Q96JE9 813 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MYL10Q9BUA6 226 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 DDX23Q9BUQ8 820 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 MRPL9Q9BYD2 267 aaKnown RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 NDST4Q9H3R1 872 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 C1GALT1Q9NS00 363 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 PIP5K1BO14986 540 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 DAPK3O43293 454 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 WIPF1O43516 503 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 HNRNPCP07910 306 aaKnown RBP eCLIP3.69□□□□□ -1.82
SMC6-208ENST00000481708 GLB1P16278 677 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MAPK7Q13164 816 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 PPA1Q15181 289 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 CRY1Q16526 586 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ACAD10Q6JQN1 1059 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MTFR2Q6P444 385 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 IL27RAQ6UWB1 636 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 Q6ZVL8 140 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 RTKN2Q8IZC4 609 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 LZTR1Q8N653 840 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 DCBLD1Q8N8Z6 715 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 TTLL11Q8NHH1 800 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 SH3RF3Q8TEJ3 882 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 AUTS2Q8WXX7 1259 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 EZH1Q92800 747 aaPredicted RBP3.69□□□□□ -1.82
SMC6-208ENST00000481708 PLEKHF1Q96S99 279 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 YME1L1Q96TA2 773 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 MIPEPQ99797 713 aa3.69□□□□□ -1.82
SMC6-208ENST00000481708 ADPGKQ9BRR6 497 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms