RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ENPEPQ07075 957 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 ADCY1Q08828 1119 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 MYO1EQ12965 1108 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 TRPC3Q13507 836 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 SMAD2Q15796 467 aaKnown RBP11.34□□□□□ -0.59
SSBP1-210ENST00000481508 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 WDR72Q3MJ13 1102 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 CAVIN1Q6NZI2 390 aaKnown RBP11.34□□□□□ -0.59
SSBP1-210ENST00000481508 FOXR2Q6PJQ5 311 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 FILIP1Q7Z7B0 1213 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 GPR149Q86SP6 731 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 TOP6BLQ8N6T0 577 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 ZNF461Q8TAF7 563 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 HCFC1R1Q9NWW0 138 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
SSBP1-210ENST00000481508 HMGXB4Q9UGU5 601 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 DSEQ9UL01 958 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 MYO10Q9HD67 2058 aa11.34□□□□□ -0.59
SSBP1-210ENST00000481508 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 C1RP00736 705 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 ASS1P00966 412 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 ATF2P15336 505 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 WARSP23381 471 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 SP100P23497 879 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 ASPAP45381 313 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 GPR15P49685 360 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 MXI1P50539 228 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 PSMC1P62191 440 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 CBX2Q14781 532 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 CCDC40Q4G0X9 1142 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 SLC39A12Q504Y0 691 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 TCERG1LQ5VWI1 586 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 FRMD5Q7Z6J6 570 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 METTL23Q86XA0 190 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 CMASQ8NFW8 434 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 HDAC7Q8WUI4 952 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 SYAP1Q96A49 352 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 MMS19Q96T76 1030 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 DPEP3Q9H4B8 488 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 PLEKHA4Q9H4M7 779 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 CRTAC1Q9NQ79 661 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 DDX43Q9NXZ2 648 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 ARMCX3Q9UH62 379 aaPredicted RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 INSL5Q9Y5Q6 135 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 ZNF638Q14966 1978 aaKnown RBP11.33□□□□□ -0.6
SSBP1-210ENST00000481508 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
SSBP1-210ENST00000481508 PATJQ8NI35 1801 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ARHGEF37A1IGU5 675 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 TMEM221A6NGB7 291 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 M0R296 226 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 PDGFRBP09619 1106 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ATICP31939 592 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 GTF2H1P32780 548 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 MARSP56192 900 aaKnown RBP11.32□□□□□ -0.6
SSBP1-210ENST00000481508 TNNC1P63316 161 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 NOP14P78316 857 aaKnown RBP11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ITIH3Q06033 890 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 DUSP4Q13115 394 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 GPR17Q13304 367 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ORC1Q13415 861 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 HSP90AA4PQ58FG1 418 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 INTS6LQ5JSJ4 861 aaKnown RBP11.32□□□□□ -0.6
SSBP1-210ENST00000481508 PPM1LQ5SGD2 360 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 KRT39Q6A163 491 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ERMP1Q7Z2K6 904 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ADHFE1Q8IWW8 467 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 TMEM86AQ8N2M4 240 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 SMG7Q92540 1137 aaKnown RBP11.32□□□□□ -0.6
SSBP1-210ENST00000481508 TATDN2Q93075 761 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ARID3AQ99856 593 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 DNAJC25Q9H1X3 360 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ZDHHC7Q9NXF8 308 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
SSBP1-210ENST00000481508 ANAPC1Q9H1A4 1944 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 C2orf72A6NCS6 295 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 H0Y858 1186 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 PRRG1O14668 218 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 N4BP1O75113 896 aaKnown RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 TACC1O75410 805 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 CLSTN1O94985 981 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
SSBP1-210ENST00000481508 FMO5P49326 533 aa11.31□□□□□ -0.6
SSBP1-210ENST00000481508 MYL7Q01449 175 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms