RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 SLC46A2Q9BY10 475 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 RBM12Q9NTZ6 932 aaKnown RBP16.39■□□□□ 0.21
LIMS3-203ENST00000480744 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
LIMS3-203ENST00000480744 SMG5Q9UPR3 1016 aaKnown RBP16.39■□□□□ 0.21
LIMS3-203ENST00000480744 FRYLO94915 3013 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 ATG2BQ96BY7 2078 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 TNNC2P02585 160 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 CTHP32929 405 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 CCR3P51677 355 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 MLLT6P55198 1093 aaPredicted RBP16.38■□□□□ 0.21
LIMS3-203ENST00000480744 TNK2Q07912 1038 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 INTS6LQ5JSJ4 861 aaKnown RBP16.38■□□□□ 0.21
LIMS3-203ENST00000480744 C1orf228Q6PIY5 440 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 TXNDC11Q6PKC3 985 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 OSTM1Q86WC4 334 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 ADGRF2Q8IZF7 708 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 CELF5Q8N6W0 485 aaKnown RBP16.38■□□□□ 0.21
LIMS3-203ENST00000480744 MAB21L3Q8N8X9 362 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 NELL1Q92832 810 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 FAM126AQ9BYI3 521 aaPredicted RBP16.38■□□□□ 0.21
LIMS3-203ENST00000480744 THG1LQ9NWX6 298 aaKnown RBP16.38■□□□□ 0.21
LIMS3-203ENST00000480744 SIX4Q9UIU6 781 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 GPR179Q6PRD1 2367 aa16.38■□□□□ 0.21
LIMS3-203ENST00000480744 GREB1Q4ZG55 1949 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 ANAPC1Q9H1A4 1944 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 MYBPHLA2RUH7 354 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 ZNF233A6NK53 670 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 KIAA0391O15091 583 aaKnown RBP16.37■□□□□ 0.21
LIMS3-203ENST00000480744 HCRTO43612 131 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CUTAO60888 179 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 LILRB5O75023 590 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 PPP6R2O75170 966 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 HMGA1P17096 107 aaKnown RBP16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CYP2F1P24903 491 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 AVPR1AP37288 418 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CXCL12P48061 93 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 NRLP54845 237 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 NLRP12P59046 1061 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 PLCB2Q00722 1185 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 AMPD3Q01432 767 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 SATB1Q01826 763 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 MYO1EQ12965 1108 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 PON2Q15165 354 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 E2F4Q16254 413 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 DDR2Q16832 855 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CCDC142Q17RM4 750 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 RALGPS2Q86X27 583 aaPredicted RBP16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CMTM8Q8IZV2 173 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 TOP6BLQ8N6T0 577 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CXorf38Q8TB03 319 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 SECISBP2LQ93073 1101 aaKnown RBP16.37■□□□□ 0.21
LIMS3-203ENST00000480744 RMDN1Q96DB5 314 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 TRIM9Q9C026 710 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 CUEDC2Q9H467 287 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 INTS13Q9NVM9 706 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 KBTBD4Q9NVX7 518 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 GDAP2Q9NXN4 497 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 GTF3C4Q9UKN8 822 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 PTPRJQ12913 1337 aa16.37■□□□□ 0.21
LIMS3-203ENST00000480744 RALGAPA1Q6GYQ0 2036 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 YEATS4O95619 227 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 F11P03951 625 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 HSP90AA1P07900 732 aaKnown RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 CSH1P0DML2 217 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 CSH2P0DML3 217 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 TDGF1P13385 188 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 WEE1P30291 646 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 RPL10AP62906 217 aaKnown RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 FOXK2Q01167 660 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 SURF1Q15526 300 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 ITPRIPL2Q3MIP1 535 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 TXNDC8Q6A555 127 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 SHC4Q6S5L8 630 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 Q6ZS52 159 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 TMEM150AQ86TG1 271 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 SPATA2LQ8IUW3 424 aaPredicted RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 SCN4BQ8IWT1 228 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 IQUBQ8NA54 791 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 TTC16Q8NEE8 873 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 LEO1Q8WVC0 666 aaPredicted RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 MRPS31Q92665 395 aaKnown RBP16.36■□□□□ 0.21
LIMS3-203ENST00000480744 HPDLQ96IR7 371 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 HSPBP1Q9NZL4 362 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 ZMYM5Q9UJ78 669 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 CCL26Q9Y258 94 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 PTPRDP23468 1912 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 DMXL1Q9Y485 3027 aa16.36■□□□□ 0.21
LIMS3-203ENST00000480744 HELZP42694 1942 aaKnown RBP16.35■□□□□ 0.21
LIMS3-203ENST00000480744 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIMS3-203ENST00000480744 PCSK1P29120 753 aa16.35■□□□□ 0.21
LIMS3-203ENST00000480744 LHX1P48742 406 aa16.35■□□□□ 0.21
LIMS3-203ENST00000480744 GAS6Q14393 721 aa16.35■□□□□ 0.21
LIMS3-203ENST00000480744 LPAL2Q16609 132 aa16.35■□□□□ 0.21
LIMS3-203ENST00000480744 SOWAHAQ2M3V2 549 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms