RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 PI4K2AQ9BTU6 479 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 DDX23Q9BUQ8 820 aaKnown RBP16.1■□□□□ 0.17
TDP2-205ENST00000480495 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
TDP2-205ENST00000480495 ATXN3LQ9H3M9 355 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 GOLPH3LQ9H4A5 285 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 BRD9Q9H8M2 597 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 ZMYM5Q9UJ78 669 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 GTF3C4Q9UKN8 822 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 CDH9Q9ULB4 789 aa16.1■□□□□ 0.17
TDP2-205ENST00000480495 KANSL1LA0AUZ9 987 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 STAU1O95793 577 aaKnown RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 CST3P01034 146 aaPredicted RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 CSH1P0DML2 217 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 CSH2P0DML3 217 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 WARSP23381 471 aaKnown RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 WEE1P30291 646 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 VIPR2P41587 438 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 MRE11P49959 708 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 CDR1P51861 262 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 CLDN10P78369 228 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 TRPC3Q13507 836 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 GRM2Q14416 872 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 KCNB1Q14721 858 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 MAPRE1Q15691 268 aaKnown RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 FAM171BQ6P995 826 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 C4orf50Q6ZRC1 276 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 ALYREFQ86V81 257 aaKnown RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 SPATA2LQ8IUW3 424 aaPredicted RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 PARD3BQ8TEW8 1205 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 GIPC2Q8TF65 315 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 ZNF516Q92618 1163 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 SYAP1Q96A49 352 aaPredicted RBP16.09■□□□□ 0.17
TDP2-205ENST00000480495 MMS19Q96T76 1030 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 OSBPL6Q9BZF3 934 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 TRPV5Q9NQA5 729 aa16.09■□□□□ 0.17
TDP2-205ENST00000480495 GOLGA6L4A6NEF3 574 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 HEPACAM2A8MVW5 462 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 PHACTR2O75167 634 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 TACC1O75410 805 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 NR3C1P04150 777 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 TNNC1P63316 161 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 GPR158Q5T848 1215 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 ARID3BQ8IVW6 561 aaPredicted RBP16.08■□□□□ 0.16
TDP2-205ENST00000480495 NELL2Q99435 816 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 SYT15Q9BQS2 421 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 MKNK1Q9BUB5 465 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 FOXQ1Q9C009 403 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 SNX25Q9H3E2 840 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 OBP2AQ9NY56 170 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 DLGAP2Q9P1A6 1054 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 TRAF3IP3Q9Y228 551 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 PIEZO1Q92508 2521 aa16.08■□□□□ 0.16
TDP2-205ENST00000480495 MYBPHLA2RUH7 354 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 LRRIQ3A6PVS8 624 aaPredicted RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 SOBPA7XYQ1 873 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 DPYSL4O14531 572 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 ZNF263O14978 683 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 DCNP07585 359 aaKnown RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 HMGA1P17096 107 aaKnown RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 CYP2F1P24903 491 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 LMO2P25791 158 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 DDX6P26196 483 aaKnown RBP eCLIP16.07■□□□□ 0.16
TDP2-205ENST00000480495 GDI1P31150 447 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 GNL1P36915 607 aaPredicted RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 MAGEA11P43364 429 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 NFIL3Q16649 462 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 WDR72Q3MJ13 1102 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 STXBP5Q5T5C0 1151 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 ZNF852Q6ZMS4 543 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 TPRG1Q6ZUI0 275 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 YAF2Q8IY57 180 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 GUF1Q8N442 669 aaKnown RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 XYLT2Q9H1B5 865 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 VRTNQ9H8Y1 702 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 HEBP1Q9NRV9 189 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 MAGEC2Q9UBF1 373 aaPredicted RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 FRMD4BQ9Y2L6 1034 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 MRPS17Q9Y2R5 130 aaKnown RBP16.07■□□□□ 0.16
TDP2-205ENST00000480495 CACNA1HO95180 2353 aa16.07■□□□□ 0.16
TDP2-205ENST00000480495 FAM170BA6NMN3 283 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 MAN2B1O00754 1011 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 MAPK13O15264 365 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 CHADO15335 359 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 HCRTO43612 131 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 NOL4O94818 638 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 F11P03951 625 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 GLULP15104 373 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 MAGEA9P43362 315 aa16.06■□□□□ 0.16
TDP2-205ENST00000480495 CASP4P49662 377 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms