RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 GTPBP10A4D1E9 387 aaKnown RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 H0Y858 1186 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 NOL4O94818 638 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 GLP2RO95838 553 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 FAM163BP0C2L3 166 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 ACO1P21399 889 aaKnown RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 GNL1P36915 607 aaPredicted RBP13.08□□□□□ -0.32
TRA2B-212ENST00000480461 RAB33AQ14088 237 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 NR1I3Q14994 352 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 DUSP6Q16828 381 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 TRIM65Q6PJ69 517 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 SCARA5Q6ZMJ2 495 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 RRAGAQ7L523 313 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 ADGRF2Q8IZF7 708 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 EFHBQ8N7U6 833 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 UBR7Q8N806 425 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 KREMEN1Q96MU8 473 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 TWNKQ96RR1 684 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 HMGXB4Q9UGU5 601 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
TRA2B-212ENST00000480461 A0A1B0GTH6 734 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 WDR27A2RRH5 827 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 MYBPHLA2RUH7 354 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 LGALS16A8MUM7 142 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-212ENST00000480461 EPHB6O15197 1021 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 TGM5O43548 720 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 ABLIM3O94929 683 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 EPCAMP16422 314 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 KLRC2P26717 231 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 CA8P35219 290 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 CLCN4P51793 760 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 ARPP19P56211 112 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 TNNC1P63316 161 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 FANCCQ00597 558 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 ORC1Q13415 861 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 EXOC3L4Q17RC7 722 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 TMEM86AQ8N2M4 240 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 PPP2R3CQ969Q6 453 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 PHF7Q9BWX1 381 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-212ENST00000480461 NIF3L1Q9GZT8 377 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 ZCWPW1Q9H0M4 648 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 CRISPLD1Q9H336 500 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 CRTAC1Q9NQ79 661 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 DDX43Q9NXZ2 648 aaKnown RBP13.07□□□□□ -0.32
TRA2B-212ENST00000480461 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 DSEQ9UL01 958 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 BARX2Q9UMQ3 279 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-212ENST00000480461 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 SIK3Q9Y2K2 1263 aa13.07□□□□□ -0.32
TRA2B-212ENST00000480461 PTPRZ1P23471 2315 aaPredicted RBP13.07□□□□□ -0.32
TRA2B-212ENST00000480461 PRR23AA6NEV1 266 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 H7C4K7 107 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
TRA2B-212ENST00000480461 SEC24AO95486 1093 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 CALCAP01258 141 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 LHX1P48742 406 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 NDST1P52848 882 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 ROR1Q01973 937 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 UBXN1Q04323 297 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 CUL2Q13617 745 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 FAM171BQ6P995 826 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 ERMP1Q7Z2K6 904 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 METTL23Q86XA0 190 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 OR6B3Q8NGW1 331 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 FAXDC2Q96IV6 333 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 RPGRIP1Q96KN7 1286 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 ACBD6Q9BR61 282 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 EMILIN2Q9BXX0 1053 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 CYP3A43Q9HB55 503 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 UBE2TQ9NPD8 197 aaPredicted RBP13.06□□□□□ -0.32
TRA2B-212ENST00000480461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRA2B-212ENST00000480461 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
TRA2B-212ENST00000480461 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
TRA2B-212ENST00000480461 OR6C75A6NL08 312 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PDGFBP01127 241 aaPredicted RBP13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
TRA2B-212ENST00000480461 CD58P19256 250 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 RAD23BP54727 409 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 PSMC1P62191 440 aaKnown RBP13.05□□□□□ -0.32
TRA2B-212ENST00000480461 INCA1Q0VD86 236 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 CETN1Q12798 172 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 GPR17Q13304 367 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 BMS1Q14692 1282 aaKnown RBP13.05□□□□□ -0.32
TRA2B-212ENST00000480461 SYCP1Q15431 976 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 IQCEQ6IPM2 695 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 ZNF280DQ6N043 979 aa13.05□□□□□ -0.32
TRA2B-212ENST00000480461 LLGL2Q6P1M3 1020 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms