RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 MSANTD4Q8NCY6 345 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 SP7Q8TDD2 431 aaPredicted RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ZSWIM1Q9BR11 485 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ACBD6Q9BR61 282 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 CXXC1Q9P0U4 656 aaPredicted RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
SIK3-209ENST00000480222 VWA8A3KMH1 1905 aa13.36□□□□□ -0.27
SIK3-209ENST00000480222 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 BTNL10A8MVZ5 291 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 M0QYV0 167 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 EFEMP2O95967 443 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 TMEM253P0C7T8 217 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 MYBL1P10243 752 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 FGFR3P22607 806 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 BCAT1P54687 386 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 TSPY1Q01534 308 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 INTS6LQ5JSJ4 861 aaKnown RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 ACAD10Q6JQN1 1059 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 TMCO2Q7Z6W1 182 aaPredicted RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 PHF13Q86YI8 300 aaPredicted RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 REXO1L1PQ8IX06 675 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 RNF168Q8IYW5 571 aaPredicted RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 SLC39A11Q8N1S5 342 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 COLGALT1Q8NBJ5 622 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 CTNNBL1Q8WYA6 563 aaPredicted RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 TMEM169Q96HH4 297 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 IGSF21Q96ID5 467 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
SIK3-209ENST00000480222 RAD9AQ99638 391 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 HESX1Q9UBX0 185 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 TSPAN16Q9UKR8 245 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 RWDD3Q9Y3V2 267 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 NCANO14594 1321 aa13.35□□□□□ -0.27
SIK3-209ENST00000480222 A0A0A6YYK5 440 aaPredicted RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 OR6C75A6NL08 312 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 H7C4K7 107 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 MICAL2O94851 1124 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 CALCAP01258 141 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 LMO2P25791 158 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 TKTP29401 623 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 ARHGAP25P42331 645 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 MAGEA10P43363 369 aaPredicted RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 PSMC1P62191 440 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 PLCB3Q01970 1234 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 GOLGA7BQ2TAP0 167 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 VARS2Q5ST30 1063 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 FAM171A1Q5VUB5 890 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 MON1BQ7L1V2 547 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 PASD1Q8IV76 773 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 FIBCD1Q8N539 461 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 CLP1Q92989 425 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 CYFIP2Q96F07 1278 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 VCPIP1Q96JH7 1222 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 HNRNPABQ99729 332 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 RTP3Q9BQQ7 232 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 MIS12Q9H081 205 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 FAM49BQ9NUQ9 324 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 TRMT1Q9NXH9 659 aaKnown RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 MYO1AQ9UBC5 1043 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 STRIP2Q9ULQ0 834 aa13.34□□□□□ -0.27
SIK3-209ENST00000480222 TIMM13Q9Y5L4 95 aaPredicted RBP13.34□□□□□ -0.27
SIK3-209ENST00000480222 NLRC5Q86WI3 1866 aa13.33□□□□□ -0.27
SIK3-209ENST00000480222 TMCO5BA8MYB1 307 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 HCRTO43612 131 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 TLL1O43897 1013 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 FTLP02792 175 aaPredicted RBP13.33□□□□□ -0.28
SIK3-209ENST00000480222 TUBB4AP04350 444 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 CALB1P05937 261 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 CCDC130P13994 396 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 MMP8P22894 467 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 ACAT1P24752 427 aaKnown RBP13.33□□□□□ -0.28
SIK3-209ENST00000480222 PBX3P40426 434 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 GALCP54803 685 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 SLC8A3P57103 927 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 SNX16P57768 344 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 BST2Q10589 180 aaKnown RBP13.33□□□□□ -0.28
SIK3-209ENST00000480222 PDCLQ13371 301 aa13.33□□□□□ -0.28
SIK3-209ENST00000480222 MRPL58Q14197 206 aaKnown RBP13.33□□□□□ -0.28
SIK3-209ENST00000480222 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms