RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 NDST1P52848 882 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 COPB1P53618 953 aaKnown RBP21.05■□□□□ 0.96
LIME1-205ENST00000480139 LRMPQ12912 555 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 SMAD4Q13485 552 aaKnown RBP21.05■□□□□ 0.96
LIME1-205ENST00000480139 CFAP221Q4G0U5 840 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PPM1LQ5SGD2 360 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 APTXQ7Z2E3 356 aaKnown RBP21.05■□□□□ 0.96
LIME1-205ENST00000480139 CRYBG2Q8N1P7 616 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 B3GALNT2Q8NCR0 500 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 JAKMIP2Q96AA8 810 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 FAM81BQ96LP2 452 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PGLYRP2Q96PD5 576 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 ARID3AQ99856 593 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 TSPY26PQ9H489 355 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 CRTAC1Q9NQ79 661 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 CISHQ9NSE2 258 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 TMLHEQ9NVH6 421 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 GTF3C4Q9UKN8 822 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PCDHB5Q9Y5E4 795 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 INSL5Q9Y5Q6 135 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 PRUNE2Q8WUY3 3088 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 C2orf16Q68DN1 1984 aa21.05■□□□□ 0.96
LIME1-205ENST00000480139 XIRP2A4UGR9 3374 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 SPTBN5Q9NRC6 3674 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 MYBPHLA2RUH7 354 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 ATP2C2O75185 946 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 RFPL2O75678 378 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 ATP1A3P13637 1013 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 PTPN1P18031 435 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 TRIM21P19474 475 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 PON1P27169 355 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 TUFMP49411 452 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 PSMC1P62191 440 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 TPM4P67936 248 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 TFF2Q03403 129 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 DUSP4Q13115 394 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 PLD1Q13393 1074 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 RARS2Q5T160 578 aaKnown RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 CES5AQ6NT32 575 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 C4orf50Q6ZRC1 276 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 GPR149Q86SP6 731 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 PPM1KQ8N3J5 372 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 UBR7Q8N806 425 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 ATAD1Q8NBU5 361 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.04■□□□□ 0.96
LIME1-205ENST00000480139 CRACR2AQ9BSW2 395 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 NT5C1AQ9BXI3 368 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 PRKD2Q9BZL6 878 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 VPS16Q9H269 839 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 CRISPLD1Q9H336 500 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 DPEP3Q9H4B8 488 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 HMGXB4Q9UGU5 601 aa21.04■□□□□ 0.96
LIME1-205ENST00000480139 CCDC195A0A1B0GUA6 201 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 PES1O00541 588 aaKnown RBP21.03■□□□□ 0.96
LIME1-205ENST00000480139 MBTPS2O43462 519 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 CD58P19256 250 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 SLC9A1P19634 815 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 PHLDB3Q6NSJ2 640 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 ENOSF1Q7L5Y1 443 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 LUZP1Q86V48 1076 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 ARHGEF19Q8IW93 802 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 C12orf76Q8N812 135 aaPredicted RBP21.03■□□□□ 0.96
LIME1-205ENST00000480139 WHAMMQ8TF30 809 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 SUSD6Q92537 303 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 ZNF707Q96C28 371 aaPredicted RBP21.03■□□□□ 0.96
LIME1-205ENST00000480139 PCED1BQ96HM7 432 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 ABI2Q9NYB9 513 aaPredicted RBP21.03■□□□□ 0.96
LIME1-205ENST00000480139 APEX2Q9UBZ4 518 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 FAM50BQ9Y247 325 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 YIPF1Q9Y548 306 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 DENND4AQ7Z401 1863 aa21.03■□□□□ 0.96
LIME1-205ENST00000480139 LGALS16A8MUM7 142 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 XYLBO75191 536 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 LRG1P02750 347 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 HAPLN1P10915 354 aaPredicted RBP21.02■□□□□ 0.96
LIME1-205ENST00000480139 MAGEA11P43364 429 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 MRPS5P82675 430 aaKnown RBP21.02■□□□□ 0.96
LIME1-205ENST00000480139 CLUL1Q15846 466 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 MDH1BQ5I0G3 518 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 FKBP15Q5T1M5 1219 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 TMC5Q6UXY8 1006 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 SPATA2LQ8IUW3 424 aaPredicted RBP21.02■□□□□ 0.96
LIME1-205ENST00000480139 MYLPFQ96A32 169 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 RIPOR3Q96MK2 946 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 NECTIN4Q96NY8 510 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 TWNKQ96RR1 684 aa21.02■□□□□ 0.96
LIME1-205ENST00000480139 GRXCR2A6NFK2 248 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 GOLGA6L19H0YKK7 550 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 ACO1P21399 889 aaKnown RBP21.01■□□□□ 0.95
LIME1-205ENST00000480139 MTHFRP42898 656 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 KCNMA1Q12791 1236 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 SMAD2Q15796 467 aaKnown RBP21.01■□□□□ 0.95
LIME1-205ENST00000480139 CCDC142Q17RM4 750 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 PTCRAQ6ISU1 281 aaPredicted RBP21.01■□□□□ 0.95
LIME1-205ENST00000480139 VSTM1Q6UX27 236 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 ACOT1Q86TX2 421 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 TTC9BQ8N6N2 239 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 SIX2Q9NPC8 291 aa21.01■□□□□ 0.95
LIME1-205ENST00000480139 USP15Q9Y4E8 981 aaPredicted RBP21.01■□□□□ 0.95
LIME1-205ENST00000480139 RFX1P22670 979 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms