RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 UROC1Q96N76 676 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 RHOXF2Q9BQY4 288 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 BEGAINQ9BUH8 593 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-204ENST00000480057 SNX25Q9H3E2 840 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 RSAD1Q9HA92 442 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 RGS18Q9NS28 235 aa11.66□□□□□ -0.54
VTI1A-204ENST00000480057 RBM12Q9NTZ6 932 aaKnown RBP11.66□□□□□ -0.54
VTI1A-204ENST00000480057 ARHGEF37A1IGU5 675 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ARL5CA6NH57 179 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 M0QYV0 167 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 SPTLC1O15269 473 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 GNL1P36915 607 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 SCNN1AP37088 669 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 MLH1P40692 756 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 AARSP49588 968 aaKnown RBP eCLIP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 GRIK3Q13003 919 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 PDCLQ13371 301 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ACAP1Q15027 740 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 MAP9Q49MG5 647 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ZNF598Q86UK7 904 aaKnown RBP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ZDHHC17Q8IUH5 632 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 RHOT1Q8IXI2 618 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ADGRF2Q8IZF7 708 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 TMEM130Q8N3G9 435 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 EIF1ADQ8N9N8 165 aaKnown RBP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 OR6B3Q8NGW1 331 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 MAIP1Q8WWC4 291 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 KRT35Q92764 455 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 RUNDC3BQ96NL0 473 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 PNKPQ96T60 521 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 GAD1Q99259 594 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ADAM2Q99965 735 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 ARFGAP3Q9NP61 516 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 CHORDC1Q9UHD1 332 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-204ENST00000480057 TSPAN16Q9UKR8 245 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 OGDHLQ9ULD0 1010 aa11.65□□□□□ -0.54
VTI1A-204ENST00000480057 A8MXQ7 604 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 KRIT1O00522 736 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 PODXLO00592 558 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 GABRDO14764 452 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 MGEA5O60502 916 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 FGGP02679 453 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 KRT3P12035 628 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SELPP16109 830 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 PSMC1P62191 440 aaKnown RBP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 FAM189BP81408 668 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 RBM10P98175 930 aaKnown RBP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 LONRF2Q1L5Z9 754 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 GOLGA7BQ2TAP0 167 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 DCUN1D2Q6PH85 259 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SLC24A5Q71RS6 500 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 XYLT1Q86Y38 959 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 KATNAL2Q8IYT4 538 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 CCDC26Q8TAB7 109 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.64□□□□□ -0.55
VTI1A-204ENST00000480057 RSPH1Q8WYR4 309 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 BTBD6Q96KE9 485 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 ZFP42Q96MM3 310 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 NCAPGQ9BPX3 1015 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SLC4A5Q9BY07 1137 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 TRPV6Q9H1D0 765 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SYNCQ9H7C4 482 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 SMARCAL1Q9NZC9 954 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 EHD2Q9NZN4 543 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 STIM2Q9P246 746 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 CYTH4Q9UIA0 394 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 L1RE1Q9UN81 338 aa11.64□□□□□ -0.55
VTI1A-204ENST00000480057 C9IYK1 514 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ZRANB2O95218 330 aaKnown RBP eCLIP11.63□□□□□ -0.55
VTI1A-204ENST00000480057 PARNO95453 639 aaKnown RBP11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ERBB2P04626 1255 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 CETN2P41208 172 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ACADSBP45954 432 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 LHX1P48742 406 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 BCAT1P54687 386 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 VSNL1P62760 191 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 HTRA3P83110 453 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 BST2Q10589 180 aaKnown RBP11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ORC1Q13415 861 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 TUSC3Q13454 348 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 CYP1B1Q16678 543 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 PTPROQ16827 1216 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 PPP1R26Q5T8A7 1209 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-204ENST00000480057 LRRC8DQ7L1W4 858 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ARCQ7LC44 396 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 MAATS1Q7Z4T9 603 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 POLNQ7Z5Q5 900 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 TMEM110Q86TL2 294 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 ACOT1Q86TX2 421 aa11.63□□□□□ -0.55
VTI1A-204ENST00000480057 SLC13A5Q86YT5 568 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms