RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 RARS2Q5T160 578 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 DDX42Q86XP3 938 aaKnown RBP eCLIP6.28□□□□□ -1.4
CPS1-207ENST00000479988 SLC9A9Q8IVB4 645 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TMEM86AQ8N2M4 240 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TDRD5Q8NAT2 981 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 N4BP2L2Q92802 583 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 ASIC4Q96FT7 647 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PGLYRP2Q96PD5 576 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 HSD17B14Q9BPX1 270 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 INTS2Q9H0H0 1204 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 FAM49BQ9NUQ9 324 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ANAPC5Q9UJX4 755 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 BRWD3Q6RI45 1802 aa6.27□□□□□ -1.4
CPS1-207ENST00000479988 MYO5AQ9Y4I1 1855 aaKnown RBP6.27□□□□□ -1.4
CPS1-207ENST00000479988 NPHP3-ACAD11A0A0J9YXS1 232 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 OR6C75A6NL08 312 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 COL6A1P12109 1028 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 PRKCIP41743 596 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PTENP60484 403 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 CDO1Q16878 200 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 WDR59Q6PJI9 974 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 CCDC89Q8N998 374 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 LPPQ93052 612 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ZNF333Q96JL9 665 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PSMB7Q99436 277 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 OXCT2Q9BYC2 517 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 TLR8Q9NR97 1041 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 DDX43Q9NXZ2 648 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 PSD3Q9NYI0 1048 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TRAV19A0A0A6YYK7 116 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 FRMD3A2A2Y4 597 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 EBAG9O00559 213 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 MAPK13O15264 365 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 SLITRK3O94933 977 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 F2P00734 622 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 RB1P06400 928 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 NOP14P78316 857 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 ADCY1Q08828 1119 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 SMARCB1Q12824 385 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 RRP1BQ14684 758 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 CCNI2Q6ZMN8 369 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 TRIM72Q6ZMU5 477 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 KLHL7Q8IXQ5 586 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 DEFB123Q8N688 67 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TTYH3Q9C0H2 523 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ELOVL4Q9GZR5 314 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 AGPAT3Q9NRZ7 376 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 HOMER3Q9NSC5 361 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 DZANK1Q9NVP4 752 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ADAM22Q9P0K1 906 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 L1RE1Q9UN81 338 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 BTNL10A8MVZ5 291 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 CREB3O43889 395 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 LYPLA2O95372 231 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TRIM49P0CI25 452 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TRIM49CP0CI26 452 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ATICP31939 592 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 OR1D2P34982 312 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PPARGP37231 505 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 NME3Q13232 169 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ZCWPW2Q504Y3 356 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ZC2HC1CQ53FD0 456 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 BSPRYQ5W0U4 402 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 GDF6Q6KF10 455 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 GPIHBP1Q8IV16 184 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 DDI1Q8WTU0 396 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 SKA2Q8WVK7 121 aaPredicted RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 EPAS1Q99814 870 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 LACRTQ9GZZ8 138 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 MUC3BQ9H195 1237 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PLEKHA5Q9HAU0 1116 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 SP110Q9HB58 689 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TNFSF13BQ9Y275 285 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 NCKAP1Q9Y2A7 1128 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ZRANB2O95218 330 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPS1-207ENST00000479988 LCA5LO95447 670 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 HLA-DRAP01903 254 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TMEM253P0C7T8 217 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PON1P27169 355 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PSMC1P62191 440 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 VSNL1P62760 191 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 GPC5P78333 572 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 GUCY2DQ02846 1103 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 SEZ6Q53EL9 994 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 CASC4Q6P4E1 433 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ABHD15Q6UXT9 468 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PPP1R21Q6ZMI0 780 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 C1orf186Q6ZWK4 172 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 B4GALNT4Q76KP1 1039 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 TAX1BP1Q86VP1 789 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 ATP6V0D2Q8N8Y2 350 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 FLCNQ8NFG4 579 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 PDCD6IPQ8WUM4 868 aaKnown RBP6.27□□□□□ -1.41
CPS1-207ENST00000479988 RSAD2Q8WXG1 361 aa6.27□□□□□ -1.41
CPS1-207ENST00000479988 RUSC1Q9BVN2 902 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms