RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SPDYAQ5MJ70 313 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 NOL9Q5SY16 702 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 BBS12Q6ZW61 710 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 SAMD7Q7Z3H4 446 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 APOBEC3FQ8IUX4 373 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 PPIL6Q8IXY8 311 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 THNSL1Q8IYQ7 743 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 EBF2Q9HAK2 575 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 USH1CQ9Y6N9 552 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 MED7O43513 233 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 UNC5CO95185 931 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 TGFB3P10600 412 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 HARSP12081 509 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 MXD4Q14582 209 aaPredicted RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 HIF1AQ16665 826 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 HADHQ16836 314 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 ZBED8Q8IZ13 594 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 PRPF31Q8WWY3 499 aaKnown RBP25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 C2orf40Q9H1Z8 148 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 WDR35Q9P2L0 1181 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 GGT7Q9UJ14 662 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 SNCAIPQ9Y6H5 919 aa25.91■■□□□ 1.74
SYNGAP1-206ENST00000479510 POC1B-GALNT4F8VUJ3 575 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 ETS1P14921 441 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 ALDH3A1P30838 453 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 TNFSF9P41273 254 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 GEMIN4P57678 1058 aaKnown RBP25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 PLCB3Q01970 1234 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 MGAT5Q09328 741 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 PDIA2Q13087 525 aaKnown RBP25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 PKN2Q16513 984 aaKnown RBP25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 ZBTB8OSQ8IWT0 167 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 RAB3IPQ96QF0 476 aaPredicted RBP25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 TCHPQ9BT92 498 aa25.9■■□□□ 1.74
SYNGAP1-206ENST00000479510 CCND1P24385 295 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 EDNRBP24530 442 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 ARL4CP56559 192 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 FASTKD3Q14CZ7 662 aaKnown RBP25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 SEZ6Q53EL9 994 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 DALRD3Q5D0E6 543 aaKnown RBP25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 SH3D19Q5HYK7 790 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 ATP11CQ8NB49 1132 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 PHTF1Q9UMS5 762 aa25.89■■□□□ 1.74
SYNGAP1-206ENST00000479510 ABLIM1O14639 778 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 TYROBPO43914 113 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZWINTO95229 277 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 SLC25A11Q02978 314 aaKnown RBP25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 MOGSQ13724 837 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZNF699Q32M78 642 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 TXNRD3NBQ6F5E7 133 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 TFAP2BQ92481 460 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 TMEM121Q9BTD3 319 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 PNMA3Q9UL41 463 aa25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZMYND8Q9ULU4 1186 aaPredicted RBP25.89■■□□□ 1.73
SYNGAP1-206ENST00000479510 EDF1O60869 148 aaKnown RBP25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 DCTN3O75935 186 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 WFS1O76024 890 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 PSMA2P25787 234 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 ASPAP45381 313 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 MAPK6Q16659 721 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 KLHL38Q2WGJ6 581 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 LRRC8CQ8TDW0 803 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 SEPT1Q8WYJ6 367 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 PAIP2Q9BPZ3 127 aaKnown RBP25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 XYLT2Q9H1B5 865 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 AGTPBP1Q9UPW5 1226 aa25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.88■■□□□ 1.73
SYNGAP1-206ENST00000479510 E7ESA3 106 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 B4GALT4O60513 344 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 SPAG7O75391 227 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 TNNC2P02585 160 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 WEE2P0C1S8 567 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 KRT3P12035 628 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 MSH2P43246 934 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 IRX3P78415 501 aaPredicted RBP25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 LACTBP83111 547 aaPredicted RBP25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 ACAP1Q15027 740 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 E2F5Q15329 346 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 DHRS4Q9BTZ2 278 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 PDGFDQ9GZP0 370 aaPredicted RBP25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 PRKCBP05771 671 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 HOXC6P09630 235 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 CA4P22748 312 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 PROZP22891 400 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 PARP6Q2NL67 630 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZBTB33Q86T24 672 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 NAT8LQ8N9F0 302 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 ZNF398Q8TD17 642 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 ALKBH8Q96BT7 664 aaKnown RBP25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 KLRG1Q96E93 195 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 L3MBTL3Q96JM7 780 aaPredicted RBP25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 RABGEF1Q9UJ41 708 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 AFG3L2Q9Y4W6 797 aa25.87■■□□□ 1.73
SYNGAP1-206ENST00000479510 IFNB1P01574 187 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 KRT16P08779 473 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ELF1P32519 619 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 CTCFP49711 727 aaPredicted RBP25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 CNTN2Q02246 1040 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 ADCY1Q08828 1119 aa25.86■■□□□ 1.73
SYNGAP1-206ENST00000479510 HHATQ5VTY9 493 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms