RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 STK24Q9Y6E0 443 aa13.85□□□□□ -0.19
CNKSR3-204ENST00000479339 DNAJC6O75061 913 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 ACSL3O95573 720 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 BMP3P12645 472 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 WDR4P57081 412 aaKnown RBP13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 CDC16Q13042 620 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 MED21Q13503 144 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 NET1Q7Z628 596 aaPredicted RBP13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 CCDC25Q86WR0 208 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 SRRM1Q8IYB3 904 aaKnown RBP13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 C12orf50Q8NA57 414 aaPredicted RBP13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 GMCL1Q96IK5 515 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 TTC25Q96NG3 672 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 MMP19Q99542 508 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 TEX13BQ9BXU2 312 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 IL17RBQ9NRM6 502 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
CNKSR3-204ENST00000479339 MYMKA6NI61 221 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ZBED4O75132 1171 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 UCHL3P15374 230 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ALOX15P16050 662 aaPredicted RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 VARSP26640 1264 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 HADHBP55084 474 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 MTTPP55157 894 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 PPP4R3CPQ6ZMV5 832 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 C3orf62Q6ZUJ4 267 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 TRPV1Q8NER1 839 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 GAB3Q8WWW8 586 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 DDX12PQ92771 950 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 NR2E3Q9Y5X4 410 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 MSCO60682 206 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 FKBP6O75344 327 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 FDX1P10109 184 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 CYBAP13498 195 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ITIH2P19823 946 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 GALCP54803 685 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ARHGAP4P98171 946 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 THOC5Q13769 683 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 FAM91A1Q658Y4 838 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 CCDC62Q6P9F0 684 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 SYDE1Q6ZW31 735 aaPredicted RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ZBED8Q8IZ13 594 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 SLC35G2Q8TBE7 412 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 FNDC8Q8TC99 324 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 DENND1AQ8TEH3 1009 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 LARP4BQ92615 738 aaKnown RBP13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 SIKE1Q9BRV8 207 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 SLC38A10Q9HBR0 1119 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 PLK2Q9NYY3 685 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 THEGQ9P2T0 379 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 WASF2Q9Y6W5 498 aa13.83□□□□□ -0.2
CNKSR3-204ENST00000479339 COL11A1P12107 1806 aaPredicted RBP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 ARHGAP10A1A4S6 786 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 TMEM247A6NEH6 219 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 RASA4BC9J798 803 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 RASA4O43374 803 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 PLA2G6O60733 806 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 CIB2O75838 187 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 SLC34A2O95436 690 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 CDK4P11802 303 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 COILP38432 576 aaPredicted RBP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 RPL5P46777 297 aaKnown RBP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 OAZ1P54368 228 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 EMP3P54852 163 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 PPP2R5CQ13362 524 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 ZNF792Q3KQV3 632 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 PDCD4Q53EL6 469 aaKnown RBP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 C11orf63Q6NUN7 778 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 C1orf228Q6PIY5 440 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 RHBDF2Q6PJF5 856 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 MTDHQ86UE4 582 aaKnown RBP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 FAM160B2Q86V87 743 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 ATP11CQ8NB49 1132 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 OR6Y1Q8NGX8 325 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 SPIRE2Q8WWL2 714 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 EURLQ9NYK6 297 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 DMTF1Q9Y222 760 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 BRCA2P51587 3418 aa13.82□□□□□ -0.2
CNKSR3-204ENST00000479339 THAP12O43422 761 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 NMT2O60551 498 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CBFA2T3O75081 653 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 UQCRBP14927 111 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 HOXD12P35452 270 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 PLCB3Q01970 1234 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 KCTD2Q14681 263 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 EXOC3L4Q17RC7 722 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 TMCO4Q5TGY1 634 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms