RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 FAM84AQ96KN4 292 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 CGRRF1Q99675 332 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 ADPGKQ9BRR6 497 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 EIF2AQ9BY44 585 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 TTYH3Q9C0H2 523 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 C11orf49Q9H6J7 331 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 AGO3Q9H9G7 860 aaKnown RBP7.19□□□□□ -1.26
USP48-208ENST00000479177 PDE11AQ9HCR9 933 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 GCNT4Q9P109 453 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 IMPACTQ9P2X3 320 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 SOX13Q9UN79 622 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 ST3GAL5Q9UNP4 418 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 SQORQ9Y6N5 450 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 PTPRJQ12913 1337 aa7.19□□□□□ -1.26
USP48-208ENST00000479177 SCN5AQ14524 2016 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 FSCN2O14926 492 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 EPHB6O15197 1021 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 P4HA2O15460 535 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 STX10O60499 249 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 IL18RAPO95256 599 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 WISP1O95388 367 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 GYPCP04921 128 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 STAG3L1P0CL83 205 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 DLATP10515 647 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 GTF2H1P32780 548 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 GCLMP48507 274 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 OSTNP61366 133 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 TLE2Q04725 743 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 NCBP1Q09161 790 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 PAK2Q13177 524 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 DSC3Q14574 896 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 EXOC3L4Q17RC7 722 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 SPRED3Q2MJR0 410 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 EPC2Q52LR7 807 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 FIGNQ5HY92 759 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 DPY19L2P1Q6NXN4 242 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 C15orf39Q6ZRI6 1047 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 LRRC8DQ7L1W4 858 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 VN1R5Q7Z5H4 357 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 UBE2Q1Q7Z7E8 422 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 USP37Q86T82 979 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 EFCAB13Q8IY85 973 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 USP38Q8NB14 1042 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 CCDC150Q8NCX0 1101 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 EPS8L3Q8TE67 593 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 CCDC74AQ96AQ1 378 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 ALKBH8Q96BT7 664 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 KLHDC7BQ96G42 594 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 PAWRQ96IZ0 340 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 SNX27Q96L92 541 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 DMRTB1Q96MA1 342 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 TOX2Q96NM4 488 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 TCF12Q99081 682 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 CRACR2AQ9BSW2 395 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 CCDC94Q9BW85 323 aaPredicted RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 LSM14BQ9BX40 385 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 TMEM117Q9H0C3 514 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 INTS2Q9H0H0 1204 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 MUC3BQ9H195 1237 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 GANQ9H2C0 597 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 TMX1Q9H3N1 280 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 NXF3Q9H4D5 531 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 MMRN2Q9H8L6 949 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 RPF1Q9H9Y2 349 aaKnown RBP7.18□□□□□ -1.26
USP48-208ENST00000479177 TMEM8AQ9HCN3 771 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 TBX21Q9UL17 535 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 PADI3Q9ULW8 664 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 RNF112Q9ULX5 631 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.18□□□□□ -1.26
USP48-208ENST00000479177 UMODL1Q5DID0 1318 aa7.18□□□□□ -1.26
USP48-208ENST00000479177 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 A0A1W2PQJ5 194 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 TTC26A0AVF1 554 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 LACTBL1A8MY62 500 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 DCDC2CA8MYV0 355 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 GOLGA6L6A8MZA4 724 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 MGEA5O60502 916 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 ADAM11O75078 769 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 MFAP3LO75121 409 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 RECQL4O94761 1208 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 NOL4O94818 638 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 PTMAP06454 111 aaKnown RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 NFICP08651 508 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 PON1P27169 355 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 GRIA4P48058 902 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 FXR1P51114 621 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP48-208ENST00000479177 GSDMDP57764 484 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 GOLGA8FQ08AF8 430 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 GOLGA8DPQ0D2H9 430 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 FAAP100Q0VG06 881 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 SURF1Q15526 300 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 LRRC26Q2I0M4 334 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 SLC10A6Q3KNW5 377 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 ZACNQ401N2 412 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 TDRD10Q5VZ19 366 aaKnown RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 LMBRD2Q68DH5 695 aaPredicted RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 KRT39Q6A163 491 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 TWF2Q6IBS0 349 aaKnown RBP7.17□□□□□ -1.26
USP48-208ENST00000479177 TRIM65Q6PJ69 517 aa7.17□□□□□ -1.26
USP48-208ENST00000479177 GBP6Q6ZN66 633 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms