RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PIRO00625 290 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 CDX4O14627 284 aaPredicted RBP18.57■□□□□ 0.56
VIM-204ENST00000478746 OGTO15294 1046 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 ADRB2P07550 413 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 LIG4P49917 911 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 ZRSR1Q15695 479 aaKnown RBP18.57■□□□□ 0.56
VIM-204ENST00000478746 JADE1Q6IE81 842 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 C11orf74Q86VG3 221 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 LRRTM3Q86VH5 581 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 MON1AQ86VX9 555 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 CD302Q8IX05 232 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 CPA6Q8N4T0 437 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 MRPS31Q92665 395 aaKnown RBP18.57■□□□□ 0.56
VIM-204ENST00000478746 GATA6Q92908 595 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 CD101Q93033 1021 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 ECT2Q9H8V3 914 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 ABI2Q9NYB9 513 aaPredicted RBP18.57■□□□□ 0.56
VIM-204ENST00000478746 THADAQ6YHU6 1953 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 DENND4CQ5VZ89 1909 aa18.57■□□□□ 0.56
VIM-204ENST00000478746 CYB561D2O14569 222 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 HMGA1P17096 107 aaKnown RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 NEK4P51957 841 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 ZNF268Q14587 947 aaPredicted RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 UAP1L1Q3KQV9 507 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 PMS2CLQ68D20 193 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 LRSAM1Q6UWE0 723 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 TSTD1Q8NFU3 115 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 FBXO18Q8NFZ0 1043 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 RIN3Q8TB24 985 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 MMTAG2Q9BU76 263 aaKnown RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 DUS2Q9NX74 493 aaKnown RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 LARSQ9P2J5 1176 aaKnown RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 MAGED2Q9UNF1 606 aaPredicted RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 AKAP13Q12802 2813 aa18.56■□□□□ 0.56
VIM-204ENST00000478746 ANKRD11Q6UB99 2663 aaPredicted RBP18.56■□□□□ 0.56
VIM-204ENST00000478746 ANO9A1A5B4 782 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 PATE3B3GLJ2 98 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 FAM189A1O60320 539 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 IRX4P78413 519 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 ST3GAL1Q11201 340 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 IL17AQ16552 155 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 DTHD1Q6ZMT9 781 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 CYP2U1Q7Z449 544 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 DCP1BQ8IZD4 617 aaKnown RBP18.55■□□□□ 0.56
VIM-204ENST00000478746 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
VIM-204ENST00000478746 TTC16Q8NEE8 873 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 CCDC26Q8TAB7 109 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 EZH1Q92800 747 aaPredicted RBP18.55■□□□□ 0.56
VIM-204ENST00000478746 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
VIM-204ENST00000478746 PCDHB6Q9Y5E3 794 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 PCDHB5Q9Y5E4 795 aa18.55■□□□□ 0.56
VIM-204ENST00000478746 LAD1O00515 517 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 HNRNPDLO14979 420 aaKnown RBP18.54■□□□□ 0.56
VIM-204ENST00000478746 CSH1P0DML2 217 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 CSH2P0DML3 217 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 NCKAP1LP55160 1127 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 NR1H3Q13133 447 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 MTF1Q14872 753 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 TMEM132DQ14C87 1099 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 WSCD1Q658N2 575 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 DEFB124Q8NES8 71 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 OSCP1Q8WVF1 389 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 ZCCHC14Q8WYQ9 949 aaKnown RBP18.54■□□□□ 0.56
VIM-204ENST00000478746 ATP2A3Q93084 1043 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 MSTO1Q9BUK6 570 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 TPSD1Q9BZJ3 242 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 KCND2Q9NZV8 630 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 CPSF3Q9UKF6 684 aaKnown RBP18.54■□□□□ 0.56
VIM-204ENST00000478746 DERAQ9Y315 318 aa18.54■□□□□ 0.56
VIM-204ENST00000478746 A0A0B4J269 797 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 NPHP3-ACAD11A0A0J9YXS1 232 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 PRPF40AO75400 957 aaKnown RBP18.53■□□□□ 0.56
VIM-204ENST00000478746 NFICP08651 508 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 SCN1AP35498 2009 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 PRPHP41219 470 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 IFNAR2P48551 515 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 DHPSP49366 369 aaPredicted RBP18.53■□□□□ 0.56
VIM-204ENST00000478746 TAF6P49848 677 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 TOB1P50616 345 aaPredicted RBP18.53■□□□□ 0.56
VIM-204ENST00000478746 FAM160A1Q05DH4 1040 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 RING1Q06587 406 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 PIGKQ92643 395 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 PLIN2Q99541 437 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 LHX6Q9UPM6 363 aa18.53■□□□□ 0.56
VIM-204ENST00000478746 DSPP15924 2871 aaKnown RBP18.53■□□□□ 0.56
VIM-204ENST00000478746 ASCC3Q8N3C0 2202 aaKnown RBP18.53■□□□□ 0.56
VIM-204ENST00000478746 PKD1L2Q7Z442 2459 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 DMXL2Q8TDJ6 3036 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 PCNX2A6NKB5 2137 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 PIGRP01833 764 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 PLA2G4BP0C869 781 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 BCKDHBP21953 392 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 GPR15P49685 360 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 HYIQ5T013 277 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 KIAA1211LQ6NV74 962 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 CCDC83Q8IWF9 413 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 KCTD17Q8N5Z5 321 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 STKLD1Q8NE28 680 aa18.52■□□□□ 0.56
VIM-204ENST00000478746 KCNN1Q92952 543 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms