RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 C2orf15Q8WU43 125 aaKnown RBP28.61■■■□□ 2.17
CCM2-211ENST00000478582 RHOBTB2Q9BYZ6 727 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 FAM124BQ9H5Z6 455 aaPredicted RBP28.61■■■□□ 2.17
CCM2-211ENST00000478582 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.61■■■□□ 2.171e-6■■■■■ 98.5
CCM2-211ENST00000478582 HSFX1Q9UBD0 423 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 NME7Q9Y5B8 376 aa28.61■■■□□ 2.17
CCM2-211ENST00000478582 GTPBP10A4D1E9 387 aaKnown RBP28.6■■■□□ 2.17
CCM2-211ENST00000478582 VNN2O95498 520 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 ZNF18P17022 549 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 ACAT1P24752 427 aaKnown RBP28.6■■■□□ 2.17
CCM2-211ENST00000478582 HOXA9P31269 272 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 ELF1P32519 619 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 ADCY1Q08828 1119 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 VWA3BQ502W6 1294 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 MIIPQ5JXC2 388 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 FAM171BQ6P995 826 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 CYP26C1Q6V0L0 522 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 SCARA5Q6ZMJ2 495 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 DHX40Q8IX18 779 aaKnown RBP28.6■■■□□ 2.17
CCM2-211ENST00000478582 FEZF2Q8TBJ5 459 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 TATDN2Q93075 761 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 HSD3B7Q9H2F3 369 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 NDST4Q9H3R1 872 aa28.6■■■□□ 2.17
CCM2-211ENST00000478582 MTMR11A4FU01 709 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 HCRTO43612 131 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 SEC24AO95486 1093 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 C8AP07357 584 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 RAP1GAPP47736 663 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 INCA1Q0VD86 236 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 IQCB1Q15051 598 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 NFE2Q16621 373 aaPredicted RBP28.59■■■□□ 2.17
CCM2-211ENST00000478582 SLC39A12Q504Y0 691 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 UNC93AQ86WB7 457 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 SYT15Q9BQS2 421 aa28.59■■■□□ 2.17
CCM2-211ENST00000478582 CCDC195A0A1B0GUA6 201 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 FAM86C2PA6NEL3 165 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 A8MXQ7 604 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 PDGFRBP09619 1106 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 HNRNPA1P09651 372 aaKnown RBP eCLIP28.58■■■□□ 2.17
CCM2-211ENST00000478582 SP100P23497 879 aaPredicted RBP28.58■■■□□ 2.17
CCM2-211ENST00000478582 TTC39CQ8N584 583 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 SLC7A14Q8TBB6 771 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 CYP4F11Q9HBI6 524 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 USTQ9Y2C2 406 aa28.58■■■□□ 2.17
CCM2-211ENST00000478582 LRRC10BA6NIK2 292 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 C2CD4DB7Z1M9 353 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 RFPL2O75678 378 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 POU2F2P09086 479 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 KRT31Q15323 416 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 MAPRE1Q15691 268 aaKnown RBP28.57■■■□□ 2.16
CCM2-211ENST00000478582 PPM1LQ5SGD2 360 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 ATAD1Q8NBU5 361 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 SPPL2BQ8TCT7 592 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 NT5C1BQ96P26 610 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 PGLYRP2Q96PD5 576 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 PRKD2Q9BZL6 878 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 CRTAC1Q9NQ79 661 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 TMLHEQ9NVH6 421 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 LIMA1Q9UHB6 759 aaKnown RBP28.57■■■□□ 2.16
CCM2-211ENST00000478582 GTF3C4Q9UKN8 822 aa28.57■■■□□ 2.16
CCM2-211ENST00000478582 MYBPHLA2RUH7 354 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 PRRG1O14668 218 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 ATP2C2O75185 946 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 CUL2Q13617 745 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 C2orf16Q68DN1 1984 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 GBP6Q6ZN66 633 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 CRYBG2Q8N1P7 616 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 EDAQ92838 391 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 ZNF707Q96C28 371 aaPredicted RBP28.56■■■□□ 2.16
CCM2-211ENST00000478582 INTS2Q9H0H0 1204 aaKnown RBP28.56■■■□□ 2.16
CCM2-211ENST00000478582 PCDHB5Q9Y5E4 795 aa28.56■■■□□ 2.16
CCM2-211ENST00000478582 PRR33A8MZF0 331 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 PTPN1P18031 435 aaKnown RBP28.55■■■□□ 2.16
CCM2-211ENST00000478582 COL9A1P20849 921 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 TBXAS1P24557 533 aaPredicted RBP28.55■■■□□ 2.16
CCM2-211ENST00000478582 NDST1P52848 882 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 DUSP4Q13115 394 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 ANKRD20A12PQ8NF67 263 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 MYCBPAPQ8TBZ2 947 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 TNIP3Q96KP6 325 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 CRISPLD1Q9H336 500 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 CBX8Q9HC52 389 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 ABCB6Q9NP58 842 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 GCNT4Q9P109 453 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 INSL5Q9Y5Q6 135 aa28.55■■■□□ 2.16
CCM2-211ENST00000478582 BECN2A8MW95 431 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 CILPO75339 1184 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 TUFMP49411 452 aaKnown RBP28.54■■■□□ 2.16
CCM2-211ENST00000478582 PSMC1P62191 440 aaKnown RBP28.54■■■□□ 2.16
CCM2-211ENST00000478582 LRMPQ12912 555 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 EXOC3L4Q17RC7 722 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 CFAP221Q4G0U5 840 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 ZDHHC14Q8IZN3 488 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 PLCD3Q8N3E9 789 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 TDRD5Q8NAT2 981 aaKnown RBP28.54■■■□□ 2.16
CCM2-211ENST00000478582 B3GALNT2Q8NCR0 500 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 FUBP3Q96I24 572 aaKnown RBP eCLIP28.54■■■□□ 2.16
CCM2-211ENST00000478582 DPEP3Q9H4B8 488 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 CISHQ9NSE2 258 aa28.54■■■□□ 2.16
CCM2-211ENST00000478582 TAB2Q9NYJ8 693 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms