RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LRRC3Q9BY71 257 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 SMYD3Q9H7B4 428 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 CRTAC1Q9NQ79 661 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.263e-6■■■■■ 49
HMGA1-206ENST00000478214 ASAH2Q9NR71 780 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 LMBRD1Q9NUN5 540 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 KIAA1468Q9P260 1216 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 IGSF9Q9P2J2 1179 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 CDH9Q9ULB4 789 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 ZFP37Q9Y6Q3 630 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-206ENST00000478214 NOTCH4Q99466 2003 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 DOCK8Q8NF50 2099 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 MYO10Q9HD67 2058 aa16.68■□□□□ 0.26
HMGA1-206ENST00000478214 ANHXE9PGG2 379 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 ZNF197O14709 1029 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 MOSPD3O75425 235 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 FAM163BP0C2L3 166 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 GJA1P17302 382 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 PPP1R2P41236 205 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 PIK3CAP42336 1068 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 RAP1GAPP47736 663 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 TDGQ13569 410 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 SGSM1Q2NKQ1 1148 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 FAM171BQ6P995 826 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 PARM1Q6UWI2 310 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 SCARA5Q6ZMJ2 495 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 UBALD2Q8IYN6 164 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 FAM200AQ8TCP9 573 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 GPR152Q8TDT2 470 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 GIPC2Q8TF65 315 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 NELFBQ8WX92 580 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 PSMG2Q969U7 264 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
HMGA1-206ENST00000478214 SDCBP2Q9H190 292 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 ZNF334Q9HCZ1 680 aaPredicted RBP16.67■□□□□ 0.26
HMGA1-206ENST00000478214 ASB3Q9Y575 518 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 NUMBLQ9Y6R0 609 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 TECTAO75443 2155 aa16.67■□□□□ 0.26
HMGA1-206ENST00000478214 TMEM221A6NGB7 291 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 M0R296 226 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 SLC16A3O15427 465 aaKnown RBP16.66■□□□□ 0.26
HMGA1-206ENST00000478214 NARSO43776 548 aaKnown RBP16.66■□□□□ 0.26
HMGA1-206ENST00000478214 ASS1P00966 412 aaKnown RBP16.66■□□□□ 0.26
HMGA1-206ENST00000478214 CYP2F1P24903 491 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 GPR15P49685 360 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 TTI2Q6NXR4 508 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 SPATA2LQ8IUW3 424 aaPredicted RBP16.66■□□□□ 0.26
HMGA1-206ENST00000478214 SLC44A3Q8N4M1 653 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 LEMD2Q8NC56 503 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 SHKBP1Q8TBC3 707 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 TAF4BQ92750 862 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 FGF14Q92915 247 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 NXPE3Q969Y0 559 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 MYLPFQ96A32 169 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 RPP25Q9BUL9 199 aaKnown RBP16.66■□□□□ 0.26
HMGA1-206ENST00000478214 CLSTN2Q9H4D0 955 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 TMEM8AQ9HCN3 771 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 ABCB6Q9NP58 842 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
HMGA1-206ENST00000478214 A8MXQ7 604 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 LRRN2O75325 713 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 MICAL2O94851 1124 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 GTF2H1P32780 548 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 STX17P56962 302 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 VEPH1Q14D04 833 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 TEAD2Q15562 447 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 DDR2Q16832 855 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 MDH1BQ5I0G3 518 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 TCERG1LQ5VWI1 586 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 KRT39Q6A163 491 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 ITIH5Q86UX2 942 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 TRIML1Q8N9V2 468 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 ASIC4Q96FT7 647 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 GBP4Q96PP9 640 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
HMGA1-206ENST00000478214 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 PRR33A8MZF0 331 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 P4HA1P13674 534 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 PTPN1P18031 435 aaKnown RBP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 MXI1P50539 228 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 PAK1Q13153 545 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 CFAP221Q4G0U5 840 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 DCAF17Q5H9S7 520 aaPredicted RBP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 HFE2Q6ZVN8 426 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 SCN4BQ8IWT1 228 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 STKLD1Q8NE28 680 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 MYCBPAPQ8TBZ2 947 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 PCED1BQ96HM7 432 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 FUBP3Q96I24 572 aaKnown RBP eCLIP16.64■□□□□ 0.25
HMGA1-206ENST00000478214 ZSWIM3Q96MP5 696 aa16.64■□□□□ 0.25
HMGA1-206ENST00000478214 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
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