RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, human

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-210	ENST00000478169	GTF2B	Q00403	316 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	ZNF268	Q14587	947 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	PDGFRL	Q15198	375 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	PLK5	Q496M5	336 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	WSCD1	Q658N2	575 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	MCTP1	Q6DN14	999 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	SLC39A4	Q6P5W5	647 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	TMEM150A	Q86TG1	271 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	MON1A	Q86VX9	555 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	GPBP1	Q86WP2	473 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	NT5DC4	Q86YG4	428 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	MAB21L3	Q8N8X9	362 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	GIPC2	Q8TF65	315 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	CHFR	Q96EP1	664 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	CALML4	Q96GE6	196 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	PYM1	Q9BRP8	204 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	EBF3	Q9H4W6	596 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	RXFP3	Q9NSD7	469 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	DPP3	Q9NY33	737 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	ABI2	Q9NYB9	513 aa	Predicted RBP	10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	CCL26	Q9Y258	94 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	PCDHB5	Q9Y5E4	795 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	STYXL1	Q9Y6J8	313 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	PCNX2	A6NKB5	2137 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	LAMA1	P25391	3075 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	FAM208B	Q5VWN6	2430 aa		10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	MYO18A	Q92614	2054 aa	Known RBP	10.42	□□□□□ -0.74
CCM2-210	ENST00000478169	CEP295	Q9C0D2	2601 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	GON4L	Q3T8J9	2241 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	HELZ	P42694	1942 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	KPNA7	A9QM74	516 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	RNF40	O75150	1001 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	RHOBTB1	O94844	696 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	KCNK5	O95279	499 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	EGF	P01133	1207 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	KRT18	P05783	430 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	NMT1	P30419	496 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	UBA7	P41226	1012 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	ACOT2	P49753	483 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	KARS	Q15046	597 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	CCDC6	Q16204	474 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	NFE2	Q16621	373 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	SV2C	Q496J9	727 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	TXNDC8	Q6A555	127 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	TRIM68	Q6AZZ1	485 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	ADAL	Q6DHV7	355 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	SYT13	Q7L8C5	426 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	CCDC26	Q8TAB7	109 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	MRPS31	Q92665	395 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	FIZ1	Q96SL8	496 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	P2RY13	Q9BPV8	354 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	ST6GALNAC4	Q9H4F1	302 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	UXT	Q9UBK9	157 aa	Predicted RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	EBF1	Q9UH73	591 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	AGO2	Q9UKV8	859 aa	Known RBP	10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	PTPRD	P23468	1912 aa		10.41	□□□□□ -0.74
CCM2-210	ENST00000478169	ASCC3	Q8N3C0	2202 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	TBCA	O75347	108 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	NEFL	P07196	543 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	GJA4	P35212	333 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	PNPLA4	P41247	253 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	CDR1	P51861	262 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	RPL10A	P62906	217 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	TSPY1	Q01534	308 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	FAM160A1	Q05DH4	1040 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	DHX8	Q14562	1220 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	POSTN	Q15063	836 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ELF2	Q15723	593 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	RNF43	Q68DV7	783 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	CPA6	Q8N4T0	437 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	LEO1	Q8WVC0	666 aa	Predicted RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ACD	Q96AP0	544 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	TRMT2B	Q96GJ1	504 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ZNF560	Q96MR9	790 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ACBD6	Q9BR61	282 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ZHX3	Q9H4I2	956 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ECT2	Q9H8V3	914 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	ABCB6	Q9NP58	842 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	BLOC1S4	Q9NUP1	217 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	PPP4R2	Q9NY27	417 aa		10.4	□□□□□ -0.74
CCM2-210	ENST00000478169	MYOF	Q9NZM1	2061 aa		10.4	□□□□□ -0.75
CCM2-210	ENST00000478169	ANKRD63	C9JTQ0	380 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	PRPF40A	O75400	957 aa	Known RBP	10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	NOL4	O94818	638 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	IL18RAP	O95256	599 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	APBB3	O95704	486 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	ARSA	P15289	507 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	DMC1	Q14565	340 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	MCM6	Q14566	821 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	MTF1	Q14872	753 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	C11orf74	Q86VG3	221 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	EFCAB13	Q8IY85	973 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	RPLP0P6	Q8NHW5	317 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	OSCP1	Q8WVF1	389 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	RAD54L	Q92698	747 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	CD101	Q93033	1021 aa		10.39	□□□□□ -0.75
CCM2-210	ENST00000478169	ATP2A3	Q93084	1043 aa		10.39	□□□□□ -0.75

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