RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 NINLQ9Y2I6 1382 aa5.61□□□□□ -1.51
LMBR1-216ENST00000477983 SCAF11Q99590 1463 aaKnown RBP5.6□□□□□ -1.51
LMBR1-216ENST00000477983 NPC1L1Q9UHC9 1359 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 KLHL33A6NCF5 533 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 WIPF3A6NGB9 483 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 E7ENX8 843 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA12O60330 932 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 SUN1O94901 812 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 ELFN1P0C7U0 828 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 MYBL2P10244 700 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 ANXA11P50995 505 aaKnown RBP5.6□□□□□ -1.51
LMBR1-216ENST00000477983 POU6F2P78424 691 aaPredicted RBP5.6□□□□□ -1.51
LMBR1-216ENST00000477983 TAP2Q03519 686 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 ZNF844Q08AG5 666 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 ABCB5Q2M3G0 1257 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 AKNAD1Q5T1N1 836 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PEG10Q86TG7 708 aaKnown RBP5.6□□□□□ -1.51
LMBR1-216ENST00000477983 SLC30A5Q8TAD4 765 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 TMEM125Q96AQ2 219 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 KLHL32Q96NJ5 620 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 TESK2Q96S53 571 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 TRHDEQ9UKU6 1024 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 IPPQ9Y573 584 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA9Q9Y5G4 932 aaKnown RBP5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA8Q9Y5G5 932 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA7Q9Y5G6 932 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA6Q9Y5G7 932 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 PCDHGA3Q9Y5H0 932 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 KIAA1210Q9ULL0 1709 aa5.6□□□□□ -1.51
LMBR1-216ENST00000477983 IQGAP1P46940 1657 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 NRXN1Q9ULB1 1477 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 DISP3Q9P2K9 1392 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 WDR27A2RRH5 827 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 HTRA2O43464 458 aaPredicted RBP5.59□□□□□ -1.51
LMBR1-216ENST00000477983 XPOTO43592 962 aaKnown RBP5.59□□□□□ -1.51
LMBR1-216ENST00000477983 GUCY2FP51841 1108 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 MTMR1Q13613 665 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 HLXQ14774 488 aaPredicted RBP5.59□□□□□ -1.51
LMBR1-216ENST00000477983 RAB39AQ14964 217 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 C3orf36Q3SXR2 165 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 FLYWCH1Q4VC44 716 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
LMBR1-216ENST00000477983 TSHZ1Q6ZSZ6 1077 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 MICALCLQ6ZW33 695 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 PTF1AQ7RTS3 328 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 CFAP52Q8N1V2 620 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 LPIN2Q92539 896 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 FBXL20Q96IG2 436 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 LRIG1Q96JA1 1093 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 DMRTA2Q96SC8 542 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 CALCOCO1Q9P1Z2 691 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 LIMCH1Q9UPQ0 1083 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 MYO5BQ9ULV0 1848 aa5.59□□□□□ -1.51
LMBR1-216ENST00000477983 TMEM131LA2VDJ0 1609 aa5.59□□□□□ -1.52
LMBR1-216ENST00000477983 NEXMIFQ5QGS0 1516 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 PIK3C2GO75747 1445 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CCDC195A0A1B0GUA6 201 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 DNAJC9-AS1A6NH13 148 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 ADM5C9JUS6 153 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 FZD9O00144 591 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
LMBR1-216ENST00000477983 EDNRBP24530 442 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 ITPKBP27987 946 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 ZNF280AP59817 542 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-216ENST00000477983 KRT85P78386 507 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 AMPD3Q01432 767 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 IL10RAQ13651 578 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CD300EQ496F6 205 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-216ENST00000477983 ZNF365Q70YC5 407 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 ADGRG5Q8IZF4 528 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 TEKT5Q96M29 485 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CCDC8Q9H0W5 538 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CPNE5Q9HCH3 593 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.58□□□□□ -1.52
LMBR1-216ENST00000477983 CDYLQ9Y232 598 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 SPATA31D1Q6ZQQ2 1576 aa5.58□□□□□ -1.52
LMBR1-216ENST00000477983 SHTN1A0MZ66 631 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 ANXA1P04083 346 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 CD1AP06126 327 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 GPD1P21695 349 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 CDKN1CP49918 316 aaPredicted RBP5.57□□□□□ -1.52
LMBR1-216ENST00000477983 KIF23Q02241 960 aaPredicted RBP5.57□□□□□ -1.52
LMBR1-216ENST00000477983 TLE1Q04724 770 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 SRSF4Q08170 494 aaKnown RBP5.57□□□□□ -1.52
LMBR1-216ENST00000477983 ITKQ08881 620 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 BECN1Q14457 450 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 PCBP2Q15366 365 aaKnown RBP eCLIP5.57□□□□□ -1.529e-7■■■■□ 24.1
LMBR1-216ENST00000477983 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 L1TD1Q5T7N2 865 aaKnown RBP5.57□□□□□ -1.52
LMBR1-216ENST00000477983 C1QL2Q7Z5L3 287 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 EXOC6Q8TAG9 804 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 COA7Q96BR5 231 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 C1QTNF7Q9BXJ2 289 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 PACSIN1Q9BY11 444 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 PANK3Q9H999 370 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 STK26Q9P289 416 aa5.57□□□□□ -1.52
LMBR1-216ENST00000477983 ISY1Q9ULR0 285 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms