RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TM4SF1P30408 202 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 EPHX2P34913 555 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 AMPHP49418 695 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 FXR1P51114 621 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS50-214ENST00000477935 CREMQ03060 361 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 PKN2Q16513 984 aaKnown RBP5.9□□□□□ -1.46
VPS50-214ENST00000477935 ATP2B3Q16720 1220 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 TIGD2Q4W5G0 525 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 CPA6Q8N4T0 437 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 IFI44Q8TCB0 444 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 MYEOVQ96EZ4 313 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 HS3ST4Q9Y661 456 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 QRICH2Q9H0J4 1663 aa5.9□□□□□ -1.47
VPS50-214ENST00000477935 BRCA1P38398 1863 aaKnown RBP5.9□□□□□ -1.47
VPS50-214ENST00000477935 UBR3Q6ZT12 1888 aa5.9□□□□□ -1.47
VPS50-214ENST00000477935 DOT1LQ8TEK3 1739 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 POLRMTO00411 1230 aaKnown RBP5.89□□□□□ -1.47
VPS50-214ENST00000477935 KIAA0391O15091 583 aaKnown RBP5.89□□□□□ -1.47
VPS50-214ENST00000477935 ALDH1L1O75891 902 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 ABHD16AO95870 558 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 ALAS1P13196 640 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 HOXC9P31274 260 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 ZNF280AP59817 542 aaPredicted RBP5.89□□□□□ -1.47
VPS50-214ENST00000477935 DDR1Q08345 913 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 FHL2Q14192 279 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 TSHZ3Q63HK5 1081 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 AMER2Q8N7J2 671 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 OR56A1Q8NGH5 318 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 MRGPRX4Q96LA9 322 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 DMRTA2Q96SC8 542 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 REXO4Q9GZR2 422 aaKnown RBP5.89□□□□□ -1.47
VPS50-214ENST00000477935 TAOK3Q9H2K8 898 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 KLHL11Q9NVR0 708 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 ASAP1Q9ULH1 1129 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 FPGT-TNNI3KV9GXZ4 949 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 KAT6AQ92794 2004 aa5.89□□□□□ -1.47
VPS50-214ENST00000477935 C4AP0C0L4 1744 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 TAF1LQ8IZX4 1826 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 CENPVL1A0A0U1RR11 272 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 LPXNO60711 386 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 NDUFA10O95299 355 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 GCSHP23434 173 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 NOGQ13253 232 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 GRM1Q13255 1194 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 RAB39AQ14964 217 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 LY6G5CQ5SRR4 150 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 ZNF627Q7L945 461 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 C2CD5Q86YS7 1000 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 CPEB3Q8NE35 698 aaKnown RBP5.88□□□□□ -1.47
VPS50-214ENST00000477935 CLPTM1LQ96KA5 538 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 GSTO2Q9H4Y5 243 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 AASDHPPTQ9NRN7 309 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 SAGE1Q9NXZ1 904 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
VPS50-214ENST00000477935 MEGF6O75095 1541 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 TOGARAM1Q9Y4F4 1720 aa5.88□□□□□ -1.47
VPS50-214ENST00000477935 CDHR4A6H8M9 788 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 TMEM200CA6NKL6 621 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 MARCH11A6NNE9 402 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 IL33O95760 270 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 CFIP05156 583 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 RPLP2P05387 115 aaKnown RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 HLA-DOAP06340 250 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 ELANEP08246 267 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 SBK3P0C264 359 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 BMPR1AP36894 532 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 DSC2Q02487 901 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 TLE1Q04724 770 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 TTF1Q15361 905 aaPredicted RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 PABPC1LQ4VXU2 614 aaKnown RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 KCNV1Q6PIU1 500 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 CTU1Q7Z7A3 348 aaKnown RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 TTC7BQ86TV6 843 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 MAPKAPK5Q8IW41 473 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 ULK2Q8IYT8 1036 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 FITM2Q8N6M3 262 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 NLGN4YQ8NFZ3 816 aaPredicted RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 NSUN6Q8TEA1 469 aaKnown RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 HOOK2Q96ED9 719 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 HSPBAP1Q96EW2 488 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 CEP89Q96ST8 783 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 ADAM2Q99965 735 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 ZSWIM1Q9BR11 485 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 TCF7L1Q9HCS4 588 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 CALCOCO1Q9P1Z2 691 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 MAP3K2Q9Y2U5 619 aa5.87□□□□□ -1.47
VPS50-214ENST00000477935 USP42Q9H9J4 1324 aaKnown RBP5.87□□□□□ -1.47
VPS50-214ENST00000477935 INSRP06213 1382 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 A0A1B0GTW7 788 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 GRM6O15303 877 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 HAUS5O94927 633 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 PDCP20941 246 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 SLC6A4P31645 630 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 OCA2Q04671 838 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 MCL1Q07820 350 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms