RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 HPSEQ9Y251 543 aa8.91□□□□□ -0.98
ERCC8-205ENST00000477893 KMT2EQ8IZD2 1858 aa8.91□□□□□ -0.98
ERCC8-205ENST00000477893 MYO10Q9HD67 2058 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 SCN1AP35498 2009 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 PVALEFA0A1B0GWK0 134 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 H0Y858 1186 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 KIAA0391O15091 583 aaKnown RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 PI15O43692 258 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 CYP11A1P05108 521 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 VIPR2P41587 438 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 GPR15P49685 360 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 PSMC1P62191 440 aaKnown RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 CYP4F8P98187 520 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 MYL7Q01449 175 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TSPY1Q01534 308 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 NHLH1Q02575 133 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 CYP24A1Q07973 514 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 MYO1EQ12965 1108 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 SNW1Q13573 536 aaKnown RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TAF12Q16514 161 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 KNOP1Q1ED39 458 aaKnown RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 DUOXA2Q1HG44 320 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 BMT2Q1RMZ1 405 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 FAM78AQ5JUQ0 283 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TANGO2Q6ICL3 276 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 LRRTM3Q86VH5 581 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 OSTM1Q86WC4 334 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 WDR49Q8IV35 697 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 DCP1BQ8IZD4 617 aaKnown RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 ADGRF2Q8IZF7 708 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 LRRC52Q8N7C0 313 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TTC16Q8NEE8 873 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 SHKBP1Q8TBC3 707 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 BORCS6Q96GS4 357 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 MMS19Q96T76 1030 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 CGRRF1Q99675 332 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 PI4K2AQ9BTU6 479 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 OXCT2Q9BYC2 517 aaPredicted RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 FOXQ1Q9C009 403 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 SCAND2PQ9GZW5 306 aaPredicted RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TBC1D17Q9HA65 648 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 ZNF334Q9HCZ1 680 aaPredicted RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 TMLHEQ9NVH6 421 aa8.9□□□□□ -0.98
ERCC8-205ENST00000477893 MAGED2Q9UNF1 606 aaPredicted RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 ZFP37Q9Y6Q3 630 aaPredicted RBP8.9□□□□□ -0.98
ERCC8-205ENST00000477893 DOCK8Q8NF50 2099 aa8.9□□□□□ -0.99
ERCC8-205ENST00000477893 TCHHQ07283 1943 aa8.9□□□□□ -0.99
ERCC8-205ENST00000477893 ZNF318Q5VUA4 2279 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 GOLGA6L4A6NEF3 574 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ZNF197O14709 1029 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PHACTR2O75167 634 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PRPF40AO75400 957 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 MOSPD3O75425 235 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 DCNP07585 359 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PDGFRBP09619 1106 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 NPR3P17342 541 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ATF6P18850 670 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 CD72P21854 359 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PAX3P23760 479 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 GABRR2P28476 465 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 POU5F1Q01860 360 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 TCF15Q12870 199 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 BIRC3Q13489 604 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 TRPC3Q13507 836 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 VEPH1Q14D04 833 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PSMD6Q15008 389 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 SURF1Q15526 300 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 CEP135Q66GS9 1140 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 SCARA5Q6ZMJ2 495 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 KRBA2Q6ZNG9 492 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 RTL10Q7L3V2 364 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 TRAPPC11Q7Z392 1133 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 DNAJB7Q7Z6W7 309 aaPredicted RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 TMC8Q8IU68 726 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 SMYD4Q8IYR2 804 aaPredicted RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 CXorf38Q8TB03 319 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ZSCAN18Q8TBC5 510 aaPredicted RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ATOH1Q92858 354 aaPredicted RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 NXPE3Q969Y0 559 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 GCNAQ96QF7 691 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 SMG9Q9H0W8 520 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 ATXN3LQ9H3M9 355 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 KIAA1586Q9HCI6 787 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 GDE1Q9NZC3 331 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
ERCC8-205ENST00000477893 USP25Q9UHP3 1055 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 PCDHB5Q9Y5E4 795 aa8.89□□□□□ -0.99
ERCC8-205ENST00000477893 NOTCH4Q99466 2003 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 NCANO14594 1321 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 A0A1W2PQ27 194 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 A0A1W2PQ64 194 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 A0A1W2PQD8 194 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 LRRIQ3A6PVS8 624 aaPredicted RBP8.88□□□□□ -0.99
ERCC8-205ENST00000477893 ATP2C2O75185 946 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 LRRN2O75325 713 aa8.88□□□□□ -0.99
ERCC8-205ENST00000477893 ZNF202O95125 648 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms