RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CENPPQ6IPU0 288 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 TRIM22Q8IYM9 498 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 CPA6Q8N4T0 437 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 TTC9BQ8N6N2 239 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 CEP120Q8N960 986 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ATAD1Q8NBU5 361 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 RIN3Q8TB24 985 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 USP33Q8TEY7 942 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 USP13Q92995 863 aaPredicted RBP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ZMAT2Q96NC0 199 aaKnown RBP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 LPIN3Q9BQK8 851 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 PRORYQ9H606 182 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ECT2Q9H8V3 914 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 IGSF5Q9NSI5 407 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 ANKEF1Q9NU02 776 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 BCCIPQ9P287 314 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 MMP17Q9ULZ9 603 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 PCDHB8Q9UN66 801 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 STK36Q9NRP7 1315 aa10.57□□□□□ -0.72
SMARCB1-206ENST00000477836 PYCARD-AS1I3L0S3 204 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 AP5Z1O43299 807 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 CTDNEP1O95476 244 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 HNRNPLP14866 589 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 RPL9P32969 192 aaKnown RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 NUCB2P80303 420 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 GPR17Q13304 367 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 ALKAL1Q6UXT8 129 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 RABEPKQ7Z6M1 372 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 BLIDQ8IZY5 108 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 MAB21L3Q8N8X9 362 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 TTC16Q8NEE8 873 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 PIGOQ8TEQ8 1089 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 HAS1Q92839 578 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 C18orf25Q96B23 403 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 FCRL3Q96P31 734 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 EIF2AK1Q9BQI3 630 aaKnown RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 SH3GLB2Q9NR46 395 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 TOPORSQ9NS56 1045 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 TDP1Q9NUW8 608 aa10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 KIAA1522Q9P206 1035 aaPredicted RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 ZNF638Q14966 1978 aaKnown RBP10.56□□□□□ -0.72
SMARCB1-206ENST00000477836 CEP192Q8TEP8 1941 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 MTMR11A4FU01 709 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 K7EQS6 105 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 M0R2N6 131 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 GJB3O75712 270 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 OAZ2O95190 189 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 IFNAR1P17181 557 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 RPL6Q02878 288 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 KCNC4Q03721 635 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 BYSLQ13895 437 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 VEPH1Q14D04 833 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 TAF12Q16514 161 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 MAP7D1Q3KQU3 841 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 XKR4Q5GH76 650 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 ATF7IP2Q5U623 682 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 GLRX5Q86SX6 157 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 SETD7Q8WTS6 366 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 HMGB4Q8WW32 186 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 BSNDQ8WZ55 320 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 WASF1Q92558 559 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 PNMA5Q96PV4 448 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 SEPT5Q99719 369 aaPredicted RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 CCDC94Q9BW85 323 aaPredicted RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 KIF9Q9HAQ2 790 aa10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 DUS2Q9NX74 493 aaKnown RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 ORC3Q9UBD5 711 aaPredicted RBP10.55□□□□□ -0.72
SMARCB1-206ENST00000477836 VPS37CA5D8V6 355 aaPredicted RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 FAM149AA5PLN7 773 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 CAPN8A6NHC0 703 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 OR6C75A6NL08 312 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 GOLGA8CPA6NN73 597 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 CCNT1O60563 726 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 DTNBO60941 627 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 CBFA2T3O75081 653 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 LYPLA2O95372 231 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 PDIA4P13667 645 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 KCNE1P15382 129 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 ATP2B1P20020 1258 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 NMT1P30419 496 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 GRM5P41594 1212 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 IFNAR2P48551 515 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 CDR1P51861 262 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 ZNF33AQ06730 810 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 CAMK2BQ13554 666 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 MTF1Q14872 753 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 NTRK3Q16288 839 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 PLEKHG6Q3KR16 790 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 MGAT5BQ3V5L5 792 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms