RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 PKN2Q16513 984 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 WDR72Q3MJ13 1102 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 SEPT14Q6ZU15 432 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 AGGF1Q8N302 714 aaeCLIP19.04■□□□□ 0.64
CCM2-209ENST00000477605 AGAP11Q8TF27 550 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 FNIP1Q8TF40 1166 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 TBC1D31Q96DN5 1066 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 RSRC1Q96IZ7 334 aaKnown RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 TMEM237Q96Q45 408 aa19.04■□□□□ 0.64
CCM2-209ENST00000477605 FARP1Q9Y4F1 1045 aaPredicted RBP19.04■□□□□ 0.64
CCM2-209ENST00000477605 TYROBPO43914 113 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 TOM1L1O75674 476 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 TCF4P15884 667 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 GEMIN4P57678 1058 aaKnown RBP19.03■□□□□ 0.64
CCM2-209ENST00000477605 DUOXA2Q1HG44 320 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 CATSPERGQ6ZRH7 1159 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 PPIL6Q8IXY8 311 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 ZBED8Q8IZ13 594 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 ZNF398Q8TD17 642 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 LRRC8CQ8TDW0 803 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 JDP2Q8WYK2 163 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 INPP5DQ92835 1189 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 PAIP2Q9BPZ3 127 aaKnown RBP19.03■□□□□ 0.64
CCM2-209ENST00000477605 MRPL4Q9BYD3 311 aaKnown RBP19.03■□□□□ 0.64
CCM2-209ENST00000477605 LRMDAQ9H2I8 198 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 CISHQ9NSE2 258 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 KLHL11Q9NVR0 708 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 HOXC10Q9NYD6 342 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 SNCAIPQ9Y6H5 919 aa19.03■□□□□ 0.64
CCM2-209ENST00000477605 LRRD1A4D1F6 860 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 CST3P01034 146 aaPredicted RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 SSTR3P32745 418 aaPredicted RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 ARL4CP56559 192 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 SLC8A3P57103 927 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 SP2Q02086 613 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 OGDHQ02218 1023 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 PDIA2Q13087 525 aaKnown RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 TAZQ16635 292 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 HIF1AQ16665 826 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 GPAT2Q6NUI2 795 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 THNSL1Q8IYQ7 743 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 ATP11CQ8NB49 1132 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 N4BP2L2Q92802 583 aaPredicted RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 ALKBH8Q96BT7 664 aaKnown RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 ANKRD27Q96NW4 1050 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 LRRC37BQ96QE4 947 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 LHX5Q9H2C1 402 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 ZMYND8Q9ULU4 1186 aaPredicted RBP19.02■□□□□ 0.64
CCM2-209ENST00000477605 C15orf41Q9Y2V0 281 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 SIP14410 1827 aa19.02■□□□□ 0.64
CCM2-209ENST00000477605 C3orf70A6NLC5 250 aaPredicted RBP19.02■□□□□ 0.63
CCM2-209ENST00000477605 SGK1O00141 431 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 FAM189A1O60320 539 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 SPAG7O75391 227 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 ANP32DO95626 131 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 PLCB3Q01970 1234 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 CAPSQ13938 189 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 HADHQ16836 314 aaKnown RBP19.02■□□□□ 0.63
CCM2-209ENST00000477605 KLHL38Q2WGJ6 581 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 HHATQ5VTY9 493 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 DPY19L2Q6NUT2 758 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 BBS12Q6ZW61 710 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 CHST13Q8NET6 341 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 FAXDC2Q96IV6 333 aa19.02■□□□□ 0.63
CCM2-209ENST00000477605 SIGLEC16A6NMB1 481 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 OGTO15294 1046 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 MAFO75444 373 aaPredicted RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 TOMM70O94826 608 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 ETS1P14921 441 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 CA4P22748 312 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 GBP2P32456 591 aaPredicted RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 RASSF2P50749 326 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 PDE4CQ08493 712 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 DNAJC3Q13217 504 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 FAM160B1Q5W0V3 765 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 FAM47EQ6ZV65 393 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 VSIG1Q86XK7 387 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 EXOC8Q8IYI6 725 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 WDTC1Q8N5D0 677 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 ANKLE1Q8NAG6 615 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 STAMBPL1Q96FJ0 436 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 DHRS4Q9BTZ2 278 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 ETNK1Q9HBU6 452 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 WDR35Q9P2L0 1181 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 E7ESA3 106 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 MED7O43513 233 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 HNRNPCL1O60812 293 aaKnown RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 BRD2P25440 801 aaKnown RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 CCNG1P51959 295 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 MYL6P60660 151 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 ADCY1Q08828 1119 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 TRPC3Q13507 836 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 FASTKD3Q14CZ7 662 aaKnown RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 KIF2BQ8N4N8 673 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 MYLK2Q9H1R3 596 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 BATF3Q9NR55 127 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 RABGEF1Q9UJ41 708 aa19.01■□□□□ 0.63
CCM2-209ENST00000477605 RPL26L1Q9UNX3 145 aaKnown RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
CCM2-209ENST00000477605 PARP14Q460N5 1801 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms