RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 KPNA7A9QM74 516 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ORC1Q13415 861 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 PLCB4Q15147 1175 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ASAP3Q8TDY4 903 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 NUDCD1Q96RS6 583 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ACKR2O00590 384 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 CXCL11O14625 94 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 GLRA2P23416 452 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 DRG2P55039 364 aaKnown RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 CCL15Q16663 113 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 TMEM176AQ96HP8 235 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ALG13Q9NP73 1137 aaKnown RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 CXCL8P10145 99 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 CYP2C8P10632 490 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 PAMP19021 973 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 SV2CQ496J9 727 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 P2RX7Q99572 595 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 INPP5FQ9Y2H2 1132 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 PCDHA2Q9Y5H9 948 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 CCDC195A0A1B0GUA6 201 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 HNRNPCL1O60812 293 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 SERPINB9P50453 376 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 AADACL2Q6P093 401 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 RASGEF1CQ8N431 466 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 LENG9Q96B70 501 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 TRIM62Q9BVG3 475 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 KATNAL1Q9BW62 490 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 UBQLN1Q9UMX0 589 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 RAP1GAPP47736 663 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 MMEL1Q495T6 779 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 EFHC1Q5JVL4 640 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 SPOUT1Q5T280 376 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 KATNAL2Q8IYT4 538 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 TSSK1BQ9BXA7 367 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 ST6GALNAC4Q9H4F1 302 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 ANGPTL2Q9UKU9 493 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 PPFIA2O75334 1257 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 PNPLA4P41247 253 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 VCPP55072 806 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 PTK6Q13882 451 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 LVRNQ6Q4G3 990 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 RASSF3Q86WH2 238 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 CNPY3Q9BT09 278 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 ZFATQ9P243 1243 aa15.31■□□□□ 0.04
HDAC6-220ENST00000477528 CPSF3Q9UKF6 684 aaKnown RBP15.31■□□□□ 0.04
HDAC6-220ENST00000477528 MYH3P11055 1940 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 AHDC1Q5TGY3 1603 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 MCF2P10911 925 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 TYK2P29597 1187 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 GNL1P36915 607 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 SESN2P58004 480 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 TMEM121Q9BTD3 319 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 A0A087WZ62 844 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 ZBTB22O15209 634 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 KITP10721 976 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 SPIRE1Q08AE8 756 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 PDK2Q15119 407 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 RAB44Q7Z6P3 723 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 EPAS1Q99814 870 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 FDXACB1Q9BRP7 624 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 SNRPAP09012 282 aaKnown RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 SKIP12755 728 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
HDAC6-220ENST00000477528 TPI1P60174 286 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 TMEM132BQ14DG7 1078 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 ZACNQ401N2 412 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 RIOX2Q8IUF8 465 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 PGBD4Q96DM1 585 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 GBP5Q96PP8 586 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 MYPNQ86TC9 1320 aa15.3■□□□□ 0.04
HDAC6-220ENST00000477528 CCDC22O60826 627 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 MTM1Q13496 603 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 DGKZQ13574 1117 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 GPC2Q8N158 579 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 LRRC57Q8N9N7 239 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 MTMR14Q8NCE2 650 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 ACTL9Q8TC94 416 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 VPS39Q96JC1 886 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 MAGEB18Q96M61 343 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 WWP1Q9H0M0 922 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 CHST7Q9NS84 486 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 USP18Q9UMW8 372 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 CICQ96RK0 1608 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-220ENST00000477528 CCNE2O96020 404 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 MARCKSL1P49006 195 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 FOXR1Q6PIV2 292 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 EMC1Q8N766 993 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 REPS2Q8NFH8 660 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 LRRC15Q8TF66 581 aa15.29■□□□□ 0.04
HDAC6-220ENST00000477528 Q9H521 79 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms