RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PANK4Q9NVE7 773 aa12.23□□□□□ -0.45
HDLBP-236ENST00000477477 THG1LQ9NWX6 298 aaKnown RBP12.23□□□□□ -0.45
HDLBP-236ENST00000477477 ITGA11Q9UKX5 1188 aa12.23□□□□□ -0.45
HDLBP-236ENST00000477477 RAB23Q9ULC3 237 aa12.23□□□□□ -0.45
HDLBP-236ENST00000477477 AGAP1Q9UPQ3 857 aa12.23□□□□□ -0.45
HDLBP-236ENST00000477477 MTMR6Q9Y217 621 aa12.23□□□□□ -0.45
HDLBP-236ENST00000477477 NUP210Q8TEM1 1887 aaPredicted RBP12.23□□□□□ -0.45
HDLBP-236ENST00000477477 GOLGA8IPA6NC78 632 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 GOLGA8JA6NMD2 632 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 CHURC1-FNTBB4DL54 471 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 HUS1O60921 280 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 PRPF40AO75400 957 aaKnown RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 SDHBP21912 280 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 DDX6P26196 483 aaKnown RBP eCLIP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 AVPR1AP37288 418 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 FNTBP49356 437 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 MYL7Q01449 175 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 DMWDQ09019 674 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 BFSP1Q12934 665 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 ITPRIPL2Q3MIP1 535 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 INTS6LQ5JSJ4 861 aaKnown RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 SCARA3Q6AZY7 606 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 LAIR1Q6GTX8 287 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 TMEM86AQ8N2M4 240 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 MAB21L3Q8N8X9 362 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 STKLD1Q8NE28 680 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 SPATA18Q8TC71 538 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 USP13Q92995 863 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 FAM84AQ96KN4 292 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 PKMYT1Q99640 499 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 FAM83CQ9BQN1 747 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 PANK2Q9BZ23 570 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 MTMR12Q9C0I1 747 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 TMEM206Q9H813 350 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 PDE11AQ9HCR9 933 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 ABCB6Q9NP58 842 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 GDAP2Q9NXN4 497 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 DDX43Q9NXZ2 648 aaKnown RBP12.22□□□□□ -0.45
HDLBP-236ENST00000477477 USP18Q9UMW8 372 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 CCL26Q9Y258 94 aa12.22□□□□□ -0.45
HDLBP-236ENST00000477477 NCOR2Q9Y618 2525 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 SOBPA7XYQ1 873 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 PRR5-ARHGAP8B1AHC4 643 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 HRO43593 1189 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 TADA3O75528 432 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 NOL4O94818 638 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 PRPF6O94906 941 aaKnown RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 TMEM191BP0C7N4 346 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 ACAT1P24752 427 aaKnown RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 CNR2P34972 360 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 RBP5P82980 135 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 ARHGAP8P85298 464 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 DDR2Q16832 855 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 SDHAF4Q5VUM1 108 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 TXNDC8Q6A555 127 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 PRR23BQ6ZRT6 265 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 LONP2Q86WA8 852 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 OSTM1Q86WC4 334 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 CCDC65Q8IXS2 484 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 ADGRF2Q8IZF7 708 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 SYNPOQ8N3V7 929 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 TOP6BLQ8N6T0 577 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 PDILTQ8N807 584 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 RIN3Q8TB24 985 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 NOC3LQ8WTT2 800 aaKnown RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 KIF9Q9HAQ2 790 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 HPS4Q9NQG7 708 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 GKN1Q9NS71 199 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 TDP1Q9NUW8 608 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 C2orf42Q9NWW7 574 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 SIX4Q9UIU6 781 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 MAGED2Q9UNF1 606 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-236ENST00000477477 SNX9Q9Y5X1 595 aa12.21□□□□□ -0.45
HDLBP-236ENST00000477477 GABRDO14764 452 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 KIAA0391O15091 583 aaKnown RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 RETP07949 1114 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 KRT19P08727 400 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 CYP2F1P24903 491 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 PCSK1P29120 753 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 HOXA6P31267 233 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 LHX1P48742 406 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 SRSF5Q13243 272 aaKnown RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 RUNX3Q13761 415 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 ZNF268Q14587 947 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 CCDC142Q17RM4 750 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 CFAP221Q4G0U5 840 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 TRIM68Q6AZZ1 485 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 STXBP4Q6ZWJ1 553 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 MON1AQ86VX9 555 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms