RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 PCDHB5Q9Y5E4 795 aa16.68■□□□□ 0.26
COMMD6-209ENST00000477377 MUC6Q6W4X9 2439 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 MAPK13O15264 365 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 CALUO43852 315 aaPredicted RBP16.67■□□□□ 0.26
COMMD6-209ENST00000477377 TACC1O75410 805 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 FAM163BP0C2L3 166 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 AOC1P19801 751 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 VIPR2P41587 438 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 MYL7Q01449 175 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 TSPY1Q01534 308 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 ZACNQ401N2 412 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 SDHAF4Q5VUM1 108 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 VITQ6UXI7 678 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 SMARCD2Q92925 531 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 PCDHA5Q9Y5H7 936 aa16.67■□□□□ 0.26
COMMD6-209ENST00000477377 F11P03951 625 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ATICP31939 592 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 PRCPP42785 496 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 STARD6P59095 220 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 PSMC1P62191 440 aaKnown RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 NFE2Q16621 373 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 DDR2Q16832 855 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 CFAP221Q4G0U5 840 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ELOA2Q8IYF1 753 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 FLCNQ8NFG4 579 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 DDX23Q9BUQ8 820 aaKnown RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 SDCBP2Q9H190 292 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ZFP14Q9HCL3 533 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ABCB6Q9NP58 842 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 FBXL21Q9UKT6 434 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 CDH9Q9ULB4 789 aa16.66■□□□□ 0.26
COMMD6-209ENST00000477377 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-209ENST00000477377 ARNTLO00327 626 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 IKBKBO14920 756 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 LRRN2O75325 713 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 NR2F2P24468 414 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 GABRR2P28476 465 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 PCSK1P29120 753 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 AP3M2P53677 418 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
COMMD6-209ENST00000477377 NHLH1Q02575 133 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 PPP3CAQ08209 521 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 PHLDB3Q6NSJ2 640 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 ITIH5Q86UX2 942 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
COMMD6-209ENST00000477377 GSDMAQ96QA5 445 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 MMS19Q96T76 1030 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 SYT15Q9BQS2 421 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 SLC46A2Q9BY10 475 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 GPR88Q9GZN0 384 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 ATXN3LQ9H3M9 355 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 ARHGEF3Q9NR81 526 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 DLGAP2Q9P1A6 1054 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 DMDP11532 3685 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 COL4A2P08572 1712 aa16.65■□□□□ 0.26
COMMD6-209ENST00000477377 TADA3O75528 432 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 NOL4O94818 638 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 KIF20AO95235 890 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 BMP6P22004 513 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 WEE1P30291 646 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 VAMP7P51809 220 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 NUBP1P53384 320 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 CDH8P55286 799 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 CYP4F8P98187 520 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 ADAM9Q13443 819 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 TRPC3Q13507 836 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 NCOA4Q13772 614 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 GRM2Q14416 872 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 ZNF658Q5TYW1 1059 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 GPIHBP1Q8IV16 184 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 ARID3BQ8IVW6 561 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 ZC3H3Q8IXZ2 948 aaKnown RBP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 MYLPFQ96A32 169 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 PCED1BQ96HM7 432 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 FUBP3Q96I24 572 aaKnown RBP eCLIP16.64■□□□□ 0.25
COMMD6-209ENST00000477377 MFSD1Q9H3U5 465 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 TBC1D17Q9HA65 648 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 TMEM30AQ9NV96 361 aa16.64■□□□□ 0.25
COMMD6-209ENST00000477377 MYO15AQ9UKN7 3530 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 PTPRDP23468 1912 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
COMMD6-209ENST00000477377 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 GLULP15104 373 aa16.63■□□□□ 0.25
COMMD6-209ENST00000477377 MAGEA11P43364 429 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms