RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 BRD9Q9H8M2 597 aa20.48■□□□□ 0.87
GMDS-204ENST00000476972 GDAP2Q9NXN4 497 aa20.48■□□□□ 0.87
GMDS-204ENST00000476972 SLC27A5Q9Y2P5 690 aa20.48■□□□□ 0.87
GMDS-204ENST00000476972 PCDHGA2Q9Y5H1 932 aa20.48■□□□□ 0.87
GMDS-204ENST00000476972 SNX9Q9Y5X1 595 aa20.48■□□□□ 0.87
GMDS-204ENST00000476972 HUS1O60921 280 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 MOSPD3O75425 235 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 SOAT2O75908 522 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 TNNI1P19237 187 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 PLD1Q13393 1074 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 TRAPPC11Q7Z392 1133 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 FMR1NBQ8N0W7 255 aaPredicted RBP20.47■□□□□ 0.87
GMDS-204ENST00000476972 ZBTB44Q8NCP5 570 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 SMARCD2Q92925 531 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 HPDLQ96IR7 371 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 ASAH2Q9NR71 780 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 DMAC2Q9NW81 257 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 ZSCAN32Q9NX65 697 aa20.47■□□□□ 0.87
GMDS-204ENST00000476972 R3HCC1Q9Y3T6 440 aaKnown RBP20.47■□□□□ 0.87
GMDS-204ENST00000476972 GOLGA6L4A6NEF3 574 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
GMDS-204ENST00000476972 GJA1P17302 382 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 VIPR2P41587 438 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 ALDH1A3P47895 512 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 EPHA5P54756 1037 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 MYO1EQ12965 1108 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 MTAPQ13126 283 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 PUM1Q14671 1186 aaKnown RBP eCLIP20.46■□□□□ 0.87
GMDS-204ENST00000476972 LRRTM3Q86VH5 581 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 OSTM1Q86WC4 334 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 SLC9A9Q8IVB4 645 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 ADGRF2Q8IZF7 708 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 ZNF687Q8N1G0 1237 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 TMEM86AQ8N2M4 240 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 TOP6BLQ8N6T0 577 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 PLEKHO2Q8TD55 490 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 NELL1Q92832 810 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 DDX43Q9NXZ2 648 aaKnown RBP20.46■□□□□ 0.87
GMDS-204ENST00000476972 HSFX1Q9UBD0 423 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 NDRG2Q9UN36 371 aaKnown RBP20.46■□□□□ 0.87
GMDS-204ENST00000476972 CEP250Q9BV73 2442 aa20.46■□□□□ 0.87
GMDS-204ENST00000476972 MED19A0JLT2 244 aaPredicted RBP20.45■□□□□ 0.86
GMDS-204ENST00000476972 MAN2B1O00754 1011 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 PDXKO00764 312 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 NR3C1P04150 777 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 MYL4P12829 197 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 PSMC3P17980 439 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 GDI1P31150 447 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 CASP4P49662 377 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 EPHB3P54753 998 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 KCNB1Q14721 858 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 SOWAHAQ2M3V2 549 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 VITQ6UXI7 678 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 DCP1BQ8IZD4 617 aaKnown RBP20.45■□□□□ 0.86
GMDS-204ENST00000476972 LEMD2Q8NC56 503 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 TMEM174Q8WUU8 243 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 IRF7Q92985 503 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 CCDC34Q96HJ3 373 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 SEPT5Q99719 369 aaPredicted RBP20.45■□□□□ 0.86
GMDS-204ENST00000476972 ZNF334Q9HCZ1 680 aaPredicted RBP20.45■□□□□ 0.86
GMDS-204ENST00000476972 ABI2Q9NYB9 513 aaPredicted RBP20.45■□□□□ 0.86
GMDS-204ENST00000476972 DLL3Q9NYJ7 618 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 NCDNQ9UBB6 729 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 NCOR2Q9Y618 2525 aa20.45■□□□□ 0.86
GMDS-204ENST00000476972 ACAT1P24752 427 aaKnown RBP20.44■□□□□ 0.86
GMDS-204ENST00000476972 MYL7Q01449 175 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 TSPY1Q01534 308 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 SMARCB1Q12824 385 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 PNOCQ13519 176 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 MGAT5BQ3V5L5 792 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 TMC8Q8IU68 726 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 ZSCAN18Q8TBC5 510 aaPredicted RBP20.44■□□□□ 0.86
GMDS-204ENST00000476972 SPATA18Q8TC71 538 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 SPPL2BQ8TCT7 592 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 C2orf15Q8WU43 125 aaKnown RBP20.44■□□□□ 0.86
GMDS-204ENST00000476972 ZNF516Q92618 1163 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 LRRC3Q9BY71 257 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 TMLHEQ9NVH6 421 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 MAPK8IP1Q9UQF2 711 aa20.44■□□□□ 0.86
GMDS-204ENST00000476972 HCRTO43612 131 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 CALUO43852 315 aaPredicted RBP20.43■□□□□ 0.86
GMDS-204ENST00000476972 LILRB5O75023 590 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 KIF20AO95235 890 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 FAM160A1Q05DH4 1040 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 TEAD2Q15562 447 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 INTS6LQ5JSJ4 861 aaKnown RBP20.43■□□□□ 0.86
GMDS-204ENST00000476972 LIMS2Q7Z4I7 341 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 ENGASEQ8NFI3 743 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 PARD3BQ8TEW8 1205 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 KBTBD7Q8WVZ9 684 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 PSMG2Q969U7 264 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 LPIN3Q9BQK8 851 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 ACBD6Q9BR61 282 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 LMAN1LQ9HAT1 526 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 TRPV4Q9HBA0 871 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 TRPV5Q9NQA5 729 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 PRMT8Q9NR22 394 aaPredicted RBP20.43■□□□□ 0.86
GMDS-204ENST00000476972 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
GMDS-204ENST00000476972 LRRIQ3A6PVS8 624 aaPredicted RBP20.42■□□□□ 0.86
GMDS-204ENST00000476972 GABRDO14764 452 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms