RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 UNC5CLQ8IV45 518 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CAMKK1Q8N5S9 505 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM71DQ8N9W8 422 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 IFI44Q8TCB0 444 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 TXLNGYQ9BZA5 131 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 MIS12Q9H081 205 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 MYLK2Q9H1R3 596 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SPON1Q9HCB6 807 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 UCKL1Q9NWZ5 548 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 MRPL39Q9NYK5 338 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 OR6C2Q9NZP2 312 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CABP1Q9NZU7 370 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 VPS28Q9UK41 221 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CBY1Q9Y3M2 126 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FADS3Q9Y5Q0 445 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FLT1P17948 1338 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CTAGE15A4D2H0 777 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 LIN7AO14910 233 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PEX1O43933 1283 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CTAGE8P0CG41 777 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ANXA8P13928 327 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ITGA6P23229 1130 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PTBP1P26599 531 aaKnown RBP eCLIP6.28□□□□□ -1.44e-7■■■■■ 31.8
SPTLC3-205ENST00000476791 MAPK3P27361 379 aaPredicted RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 GPC1P35052 558 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PTPN9P43378 593 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CRKLP46109 303 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 DMC1Q14565 340 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 NFIL3Q16649 462 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ANXA8L1Q5VT79 327 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 GPR139Q6DWJ6 353 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 PGM2L1Q6PCE3 622 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CTAGE6Q86UF2 777 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ANKLE2Q86XL3 938 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ERO1BQ86YB8 467 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CTAGE4Q8IX94 777 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 LRRC8CQ8TDW0 803 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 IFT74Q96LB3 600 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SGCZQ96LD1 299 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SELENOSQ9BQE4 189 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CCDC77Q9BR77 488 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 OSGEPL1Q9H4B0 414 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 SPACA1Q9HBV2 294 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 MRPL47Q9HD33 250 aaKnown RBP6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 TRIM10Q9UDY6 481 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CACNG2Q9Y698 323 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 FHAD1B1AJZ9 1412 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 ACEP12821 1306 aa6.28□□□□□ -1.4
SPTLC3-205ENST00000476791 CCDC162PA2VCL2 907 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 NUDT19A8MXV4 375 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 SYN3O14994 580 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 VSIG8P0DPA2 414 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 CKMT1AP12532 417 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 TLX1P31314 330 aaPredicted RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 MFAP3P55082 362 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 EEF1A1P68104 462 aaKnown RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 EEF1A2Q05639 463 aaKnown RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 C2orf54Q08AI8 447 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF252P-AS1Q0IIN9 211 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 PON2Q15165 354 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 EEF1A1P5Q5VTE0 462 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 ALG1LQ6GMV1 187 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 ST13P4Q8IZP2 240 aaPredicted RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 GPR161Q8N6U8 529 aaKnown RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 MAGEC3Q8TD91 643 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 GRK7Q8WTQ7 553 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 ASZ1Q8WWH4 475 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 HSPH1Q92598 858 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 ESYT1Q9BSJ8 1104 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 PINK1Q9BXM7 581 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 NUF2Q9BZD4 464 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 VPS16Q9H269 839 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 PLEKHA4Q9H4M7 779 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 FBRSQ9HAH7 460 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 INTS7Q9NVH2 962 aaKnown RBP6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 CYTH4Q9UIA0 394 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 GJD2Q9UKL4 321 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 TNFSF13BQ9Y275 285 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 GIT1Q9Y2X7 761 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 CAPN7Q9Y6W3 813 aa6.27□□□□□ -1.4
SPTLC3-205ENST00000476791 MEX3AA1L020 520 aaKnown RBP6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 BIRC5O15392 142 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 ZSCAN12O43309 604 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 CRYZL1O95825 349 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 SNRNP70P08621 437 aaKnown RBP6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 CHRM5P08912 532 aaPredicted RBP6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 KRT4P19013 534 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 PDIA3P30101 505 aaKnown RBP6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 GBP1P32455 592 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 IFNA8P32881 189 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 ATXN1P54253 815 aaKnown RBP6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 CASP7P55210 303 aa6.27□□□□□ -1.41
SPTLC3-205ENST00000476791 INSM1Q01101 510 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms