RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 UBA3Q8TBC4 463 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 ZC3H15Q8WU90 426 aaKnown RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 HPDLQ96IR7 371 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 CPXM1Q96SM3 734 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 ELOVL4Q9GZR5 314 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 SAE1Q9UBE0 346 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TBK1Q9UHD2 729 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 PCSK1NQ9UHG2 260 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 SGK1O00141 431 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MAGEB2O15479 319 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MICAL2O94851 1124 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TTC4O95801 387 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 ERBB2P04626 1255 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MAGEA9P43362 315 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 LMNB2Q03252 620 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 PTPN11Q06124 597 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 GPS1Q13098 491 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TMEM132DQ14C87 1099 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 AMHR2Q16671 573 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 ZNF792Q3KQV3 632 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TFDP3Q5H9I0 405 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 PPP1R15BQ5SWA1 713 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TAOK1Q7L7X3 1001 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TAB3Q8N5C8 712 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 SLC4A11Q8NBS3 891 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 BBOF1Q8ND07 529 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 PPTC7Q8NI37 304 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 SYT17Q9BSW7 474 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TSPYL1Q9H0U9 437 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 C10orf88Q9H8K7 445 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 INTS9Q9NV88 658 aaKnown RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 NINJ2Q9NZG7 142 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 hCG_1818297A0A087WSY0 165 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CCL15-CCL14A0A0B4J2E2 113 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 H3BRB1 525 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 P4HA1P13674 534 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 KLRC2P26717 231 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CDH5P33151 784 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 MMP13P45452 471 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CCL15Q16663 113 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SLC10A6Q3KNW5 377 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 LRRC38Q5VT99 294 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 MTHFD1LQ6UB35 978 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CAPN12Q6ZSI9 719 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 KIAA0319LQ8IZA0 1049 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 DYDC1Q8WWB3 177 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 HSPH1Q92598 858 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TMEM176AQ96HP8 235 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 RBM15Q96T37 977 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 PRMT1Q99873 361 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TMEM121Q9BTD3 319 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 FAM49AQ9H0Q0 323 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 VTA1Q9NP79 307 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 KCNK9Q9NPC2 374 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 DDX56Q9NY93 547 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 DDX20Q9UHI6 824 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SBF1O95248 1867 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 BTBD19C9JJ37 291 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CILPO75339 1184 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 PAEPP09466 180 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ADCY1Q08828 1119 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 LRRC14Q15048 493 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 GRIK4Q16099 956 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 HADHQ16836 314 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 KIZQ2M2Z5 673 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ANKRD42Q8N9B4 389 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ARHGEF2Q92974 986 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 KIF12Q96FN5 646 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CHMP6Q96FZ7 201 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ACAP3Q96P50 834 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TMEM109Q9BVC6 243 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 NFKBIZQ9BYH8 718 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ROPN1BQ9BZX4 212 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ADAM7Q9H2U9 754 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ROPN1Q9HAT0 212 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SIGLEC16A6NMB1 481 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SRRM3A6NNA2 597 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 GOLGA8MH3BSY2 632 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TSPAN1O60635 241 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 LRCH4O75427 683 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 IL1R2P27930 398 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 CDKN2BP42772 138 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ERMARDQ5T6L9 678 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 LDLRAD1Q5T700 205 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 FAM102AQ5T9C2 384 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 MAMDC4Q6UXC1 1216 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 TADA2BQ86TJ2 420 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 SPATS2Q86XZ4 545 aaKnown RBP9.41□□□□□ -0.9
CCDC66-216ENST00000476142 XYLT1Q86Y38 959 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ALLCQ8N6M5 410 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 OR6J1Q8NGC5 347 aa9.41□□□□□ -0.9
CCDC66-216ENST00000476142 ADPGKQ9BRR6 497 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms