RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 SYT13Q7L8C5 426 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 BRAPQ7Z569 592 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
TTC38-206ENST00000475467 ZFYVE19Q96K21 471 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 PLIN2Q99541 437 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 LPIN3Q9BQK8 851 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 VPS45Q9NRW7 570 aa13.32□□□□□ -0.28
TTC38-206ENST00000475467 TM4SF5O14894 197 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 KIAA0391O15091 583 aaKnown RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 HUS1O60921 280 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 PRAMEF12O95522 483 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 TCF3P15923 654 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 GAP43P17677 238 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 LHX1P48742 406 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 CYP4F8P98187 520 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 DMWDQ09019 674 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 PLA2G2CQ5R387 149 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 ZNF720Q7Z2F6 126 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 LRRC52Q8N7C0 313 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 MAB21L3Q8N8X9 362 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 USP13Q92995 863 aaPredicted RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 P2RY13Q9BPV8 354 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 ARRDC1-AS1Q9H2J1 176 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 BLOC1S4Q9NUP1 217 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 STK17AQ9UEE5 414 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 R3HCC1Q9Y3T6 440 aaKnown RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
TTC38-206ENST00000475467 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
TTC38-206ENST00000475467 SCN1AP35498 2009 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PPEF2O14830 753 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 AXIN1O15169 862 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 EXTL3O43909 919 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PRPF40AO75400 957 aaKnown RBP13.3□□□□□ -0.28
TTC38-206ENST00000475467 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PCSK1P29120 753 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PMLP29590 882 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PPP3CCP48454 512 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 ACOT2P49753 483 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 TNK2Q07912 1038 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 MAPRE1Q15691 268 aaKnown RBP13.3□□□□□ -0.28
TTC38-206ENST00000475467 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 WDR44Q5JSH3 913 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 WSCD1Q658N2 575 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 FSTL4Q6MZW2 842 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 SLC39A4Q6P5W5 647 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 TTC9BQ8N6N2 239 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 OSCP1Q8WVF1 389 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 POMGNT1Q8WZA1 660 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 ATP2A3Q93084 1043 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 KIF2CQ99661 725 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 EBF3Q9H4W6 596 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 GDAP2Q9NXN4 497 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
TTC38-206ENST00000475467 ZNF638Q14966 1978 aaKnown RBP13.3□□□□□ -0.28
TTC38-206ENST00000475467 SDK1Q7Z5N4 2213 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 KIF26AQ9ULI4 1882 aaPredicted RBP13.29□□□□□ -0.28
TTC38-206ENST00000475467 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 SOAT2O75908 522 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 NOL4O94818 638 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 APBB3O95704 486 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 PLCG1P19174 1290 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 GARTP22102 1010 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TXLNAP40222 546 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 MPLP40238 635 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 DPP6P42658 865 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 SRSF5Q13243 272 aaKnown RBP13.29□□□□□ -0.28
TTC38-206ENST00000475467 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
TTC38-206ENST00000475467 MTF1Q14872 753 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 SURF1Q15526 300 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 HSF5Q4G112 596 aaPredicted RBP13.29□□□□□ -0.28
TTC38-206ENST00000475467 STPG1Q5TH74 334 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TMEM150AQ86TG1 271 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 GIPC2Q8TF65 315 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 CD101Q93033 1021 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 LSM14BQ9BX40 385 aaKnown RBP13.29□□□□□ -0.28
TTC38-206ENST00000475467 ECT2Q9H8V3 914 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TCHHQ07283 1943 aa13.29□□□□□ -0.28
TTC38-206ENST00000475467 TSC2P49815 1807 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 GDF9O60383 454 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 RNF40O75150 1001 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 PPP1R37O75864 691 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 FAM163BP0C2L3 166 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 GJB2P29033 226 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 NMT1P30419 496 aaKnown RBP13.28□□□□□ -0.28
TTC38-206ENST00000475467 GJA4P35212 333 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 MAGEA11P43364 429 aa13.28□□□□□ -0.28
TTC38-206ENST00000475467 IFNAR2P48551 515 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms