RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 RDM1Q8NG50 284 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 ZBTB45Q96K62 511 aaPredicted RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 PITPNM3Q9BZ71 974 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 KRT82Q9NSB4 513 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 DGAT1O75907 488 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 CFHP08603 1231 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 STX2P32856 288 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 DSG3P32926 999 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 NLRP11P59045 1033 aaKnown RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 AP1B1Q10567 949 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 MOGSQ13724 837 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 GSTA3Q16772 222 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 CLEC16AQ2KHT3 1053 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 ACSBG2Q5FVE4 666 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 ZBTB41Q5SVQ8 909 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 SCARA3Q6AZY7 606 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 DNAJC14Q6Y2X3 702 aaPredicted RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 CCDC105Q8IYK2 499 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 STKLD1Q8NE28 680 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 TUBGCP5Q96RT8 1024 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 DDX43Q9NXZ2 648 aaKnown RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 ANAPC7Q9UJX3 599 aa13.69□□□□□ -0.22
CCNL1-216ENST00000475298 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
CCNL1-216ENST00000475298 CAPN9O14815 690 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 ASLP04424 464 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 CCDC166P0CW27 439 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 BRAFP15056 766 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 LIG4P49917 911 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 NEK3P51956 506 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 SLC34A1Q06495 639 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 ANGEL2Q5VTE6 544 aaKnown RBP13.68□□□□□ -0.22
CCNL1-216ENST00000475298 ABHD15Q6UXT9 468 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 C1orf54Q8WWF1 131 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
CCNL1-216ENST00000475298 MAF1Q9H063 256 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 ARHGAP28Q9P2N2 729 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 PCYOX1Q9UHG3 505 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 USH1CQ9Y6N9 552 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 TMEM221A6NGB7 291 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 TNNI1P19237 187 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 PTPN4P29074 926 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 COILP38432 576 aaPredicted RBP13.68□□□□□ -0.22
CCNL1-216ENST00000475298 DEUP1Q05D60 604 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 MPP3Q13368 585 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 EMC2Q15006 297 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 SEZ6Q53EL9 994 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
CCNL1-216ENST00000475298 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 SEPT14Q6ZU15 432 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 PASD1Q8IV76 773 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 HIC2Q96JB3 615 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 HERPUD2Q9BSE4 406 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 C17orf75Q9HAS0 396 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCNL1-216ENST00000475298 STARD13Q9Y3M8 1113 aa13.68□□□□□ -0.22
CCNL1-216ENST00000475298 PFDN1O60925 122 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 TMCC1O94876 653 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 EDN1P05305 212 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 GARTP22102 1010 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 RRM1P23921 792 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 PSPC1Q8WXF1 523 aaKnown RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ATG4AQ8WYN0 398 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CADM1Q9BY67 442 aaKnown RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ASCC2Q9H1I8 757 aaPredicted RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 UVRAGQ9P2Y5 699 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 MTRF1LQ9UGC7 380 aaKnown RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 MYPNQ86TC9 1320 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 LCTP09848 1927 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 MAFGO15525 162 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 FDX1P10109 184 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 UNGP13051 313 aaPredicted RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 HSPA6P17066 643 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 RPS12P25398 132 aaKnown RBP13.67□□□□□ -0.22
CCNL1-216ENST00000475298 MAPK4P31152 587 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 GTF2H1P32780 548 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CDK7P50613 346 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 DCAF15Q66K64 600 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CEP128Q6ZU80 1094 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CYP4X1Q8N118 509 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ACAD9Q9H845 621 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 ANKFY1Q9P2R3 1169 aa13.67□□□□□ -0.22
CCNL1-216ENST00000475298 CIDEBQ9UHD4 219 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms