RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 FSCN2O14926 492 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 ADAM12O43184 909 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PAEPP09466 180 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 TPM1P09493 284 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CTSAP10619 480 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 SKILP12757 684 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 FERP16591 822 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CHRNB2P17787 502 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PTPN1P18031 435 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 FECHP22830 423 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PRKCIP41743 596 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 GLUD2P49448 558 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 UBE3AQ05086 875 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 GPM6BQ13491 265 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 MEA1Q16626 185 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CCDC142Q17RM4 750 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CTXN3Q4LDR2 81 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PRPF38BQ5VTL8 546 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 ANKS3Q6ZW76 656 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 SLC47A2Q86VL8 602 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CNGA4Q8IV77 575 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 THEM5Q8N1Q8 247 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 C12orf29Q8N999 325 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 OLIG1Q8TAK6 271 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 POF1BQ8WVV4 589 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 AUTS2Q8WXX7 1259 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 DDX1Q92499 740 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 ANP32BQ92688 251 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 HEXIM2Q96MH2 286 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PANX2Q96RD6 677 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CLSTN3Q9BQT9 956 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 SYT11Q9BT88 431 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 C11orf84Q9BUA3 381 aaPredicted RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 ZCWPW1Q9H0M4 648 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 SLC28A3Q9HAS3 691 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 ABHD10Q9NUJ1 306 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 TMLHEQ9NVH6 421 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 MTRRQ9UBK8 725 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 PUF60Q9UHX1 559 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 NOCTQ9UK39 431 aaKnown RBP10.66□□□□□ -0.7
COL8A1-206ENST00000474648 CDH9Q9ULB4 789 aa10.66□□□□□ -0.7
COL8A1-206ENST00000474648 OR6C75A6NL08 312 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 H7C4K7 107 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 SLC34A2O95436 690 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 CXCL14O95715 111 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 CFHP08603 1231 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 OR4Q2P0C623 313 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 VDRP11473 427 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 CYP11B1P15538 503 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 RPL17P18621 184 aaKnown RBP10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PCSK1P29120 753 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 EMP3P54852 163 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 BPIFB4P59827 614 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PSMC1P62191 440 aaKnown RBP10.65□□□□□ -0.7
COL8A1-206ENST00000474648 ARID5AQ03989 594 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PTK2Q05397 1052 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 ASIC2Q16515 512 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 KIAA1841Q6NSI8 718 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 PAQR9Q6ZVX9 377 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 NOP9Q86U38 636 aaKnown RBP10.65□□□□□ -0.7
COL8A1-206ENST00000474648 MRPL43Q8N983 215 aaKnown RBP10.65□□□□□ -0.7
COL8A1-206ENST00000474648 B3GALNT2Q8NCR0 500 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 MYCBPAPQ8TBZ2 947 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 SLC20A1Q8WUM9 679 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 ZNF606Q8WXB4 792 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 CHP1Q99653 195 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 SYT15Q9BQS2 421 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 B3GNT5Q9BYG0 378 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 FNIP2Q9P278 1114 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 GTF3C4Q9UKN8 822 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 KIAA1257Q9ULG3 409 aa10.65□□□□□ -0.7
COL8A1-206ENST00000474648 C2orf71A6NGG8 1288 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 HIDE1A8MVS5 230 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 RFXAPO00287 272 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 C2CD2LO14523 706 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 LPXNO60711 386 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 VNN2O95498 520 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 SERPING1P05155 500 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 URODP06132 367 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 PLEKP08567 350 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 BRD2P25440 801 aaKnown RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 GNA15P30679 374 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 IRS1P35568 1242 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 GSDMDP57764 484 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 CDK17Q00537 523 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 CCDC173Q0VFZ6 552 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 CNGA2Q16280 664 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 PSMD5Q16401 504 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 ASTE1Q2TB18 679 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 MDH1BQ5I0G3 518 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 PPP1R26Q5T8A7 1209 aaPredicted RBP10.64□□□□□ -0.71
COL8A1-206ENST00000474648 ARHGAP17Q68EM7 881 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 SLC8B1Q6J4K2 584 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
COL8A1-206ENST00000474648 LCLAT1Q6UWP7 414 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms