RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 CYTH4Q9UIA0 394 aa20.95■□□□□ 0.94
SSR1-204ENST00000474597 CASTOR2A6NHX0 329 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 PROSCO94903 275 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 POMCP01189 267 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 HSPA6P17066 643 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 CTNNA1P35221 906 aaKnown RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 GPD2P43304 727 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 CLCNKBP51801 687 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 PSMC1P62191 440 aaKnown RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 GRIK3Q13003 919 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 MBTPS1Q14703 1052 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 SEL1L2Q5TEA6 688 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 SLC24A5Q71RS6 500 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 KRT35Q92764 455 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 CD101Q93033 1021 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 NAP1L3Q99457 506 aaPredicted RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 FTHL17Q9BXU8 183 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 RBM12Q9NTZ6 932 aaKnown RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 WARSP23381 471 aaKnown RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 PDCLQ13371 301 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 FBXO38Q6PIJ6 1188 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 DSTYKQ6XUX3 929 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 PDCL2Q8N4E4 241 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 ALG3Q92685 438 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 TNIP3Q96KP6 325 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 RNPC3Q96LT9 517 aaKnown RBP20.94■□□□□ 0.94
SSR1-204ENST00000474597 MCEEQ96PE7 176 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 CPXM1Q96SM3 734 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 DPEP3Q9H4B8 488 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 ST7Q9NRC1 585 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 CACNG4Q9UBN1 327 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.94■□□□□ 0.94
SSR1-204ENST00000474597 PCDHA3Q9Y5H8 950 aa20.94■□□□□ 0.94
SSR1-204ENST00000474597 GOLGA8SH3BPF8 625 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 GJB6O95452 261 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 EOMESO95936 686 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 TUBBP07437 444 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 FAM163BP0C2L3 166 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 FGFR1P11362 822 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 RWDD2BP57060 319 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 ZNF211Q13398 564 aaPredicted RBP20.93■□□□□ 0.94
SSR1-204ENST00000474597 DCAF12L1Q5VU92 463 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 LIMS2Q7Z4I7 341 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 CRYBG2Q8N1P7 616 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 DDX27Q96GQ7 796 aaKnown RBP20.93■□□□□ 0.94
SSR1-204ENST00000474597 SENP8Q96LD8 212 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 PLVAPQ9BX97 442 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 NME7Q9Y5B8 376 aa20.93■□□□□ 0.94
SSR1-204ENST00000474597 TMEM191CA6NGB0 347 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 C9IYK1 514 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 PQBP1O60828 265 aaKnown RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 ERBB2P04626 1255 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 LMO2P25791 158 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 SSR1P43307 286 aaKnown RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 RPL7AP62424 266 aaKnown RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 ZNF268Q14587 947 aaPredicted RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 LONRF2Q1L5Z9 754 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 ARHGAP17Q68EM7 881 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 ZNF598Q86UK7 904 aaKnown RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 CPNE8Q86YQ8 564 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 TTC7AQ9ULT0 858 aaPredicted RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 TCRBV5S1A1TA0A578 114 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 KRIT1O00522 736 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 FGGP02679 453 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 SETSIPP0DME0 302 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 KRT3P12035 628 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 H2AFXP16104 143 aaPredicted RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 MAN1A1P33908 653 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 MARCKSL1P49006 195 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 PEX5P50542 639 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 GSCP56915 257 aaPredicted RBP20.92■□□□□ 0.94
SSR1-204ENST00000474597 SNX16P57768 344 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 UPP1Q16831 310 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 WSCD1Q658N2 575 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 C8orf74Q6P047 294 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 GLB1LQ6UWU2 654 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 TJP2Q9UDY2 1190 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 USTQ9Y2C2 406 aa20.92■□□□□ 0.94
SSR1-204ENST00000474597 TARSL2A2RTX5 802 aaKnown RBP20.91■□□□□ 0.94
SSR1-204ENST00000474597 HCRTO43612 131 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 MCM3P25205 808 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 GABRB2P47870 512 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 TUSC3Q13454 348 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 RTN4RL1Q86UN2 441 aaPredicted RBP20.91■□□□□ 0.94
SSR1-204ENST00000474597 XYLT1Q86Y38 959 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 TMEM86AQ8N2M4 240 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 UROC1Q96N76 676 aa20.91■□□□□ 0.94
SSR1-204ENST00000474597 SIGLEC16A6NMB1 481 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 CCDC188H7C350 402 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 PITPNM1O00562 1244 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 ADORA2BP29275 332 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 ATN1P54259 1190 aaPredicted RBP20.9■□□□□ 0.94
SSR1-204ENST00000474597 PIGHQ14442 188 aaPredicted RBP20.9■□□□□ 0.94
SSR1-204ENST00000474597 OSTM1Q86WC4 334 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 URGCPQ8TCY9 931 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 PNKPQ96T60 521 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 AP1M1Q9BXS5 423 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 GOLGA6L10A0A0M3HER8 536 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 B3GAT3O94766 335 aa20.9■□□□□ 0.94
SSR1-204ENST00000474597 PFKMP08237 780 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms