RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SPATA18Q8TC71 538 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 KBTBD7Q8WVZ9 684 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 ZNF516Q92618 1163 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 IRF7Q92985 503 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 ANKRD36BP1Q96IX9 119 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 NELL2Q99435 816 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 PI4K2AQ9BTU6 479 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 SLITRK6Q9H5Y7 841 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 GTF3C4Q9UKN8 822 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 CFAP54Q96N23 3096 aa19.95■□□□□ 0.78
COL7A1-209ENST00000474432 GREB1Q4ZG55 1949 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 PRAMEF12O95522 483 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 CST3P01034 146 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-209ENST00000474432 F11P03951 625 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 SNRPFP62306 86 aaKnown RBP19.94■□□□□ 0.78
COL7A1-209ENST00000474432 CYP24A1Q07973 514 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 PSMD6Q15008 389 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 SURF1Q15526 300 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 DUOXA2Q1HG44 320 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 SDHAF4Q5VUM1 108 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 ZNF852Q6ZMS4 543 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 TRAPPC11Q7Z392 1133 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 FAM200AQ8TCP9 573 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 PLEKHO2Q8TD55 490 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 NKD2Q969F2 451 aaPredicted RBP19.94■□□□□ 0.78
COL7A1-209ENST00000474432 E2F7Q96AV8 911 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 PAGE5Q96GU1 130 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 HPDLQ96IR7 371 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 SLC46A2Q9BY10 475 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 TASP1Q9H6P5 420 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 HPSEQ9Y251 543 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 NME7Q9Y5B8 376 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 R4GN57 208 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 PTPRDP23468 1912 aa19.94■□□□□ 0.78
COL7A1-209ENST00000474432 EP300Q09472 2414 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-209ENST00000474432 A0A1B0GVL5 298 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 MYBPHLA2RUH7 354 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 ZNF263O14978 683 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 ATP2C2O75185 946 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 FGF19O95750 216 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 PFKFB1P16118 471 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 CMA1P23946 247 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 CYP2F1P24903 491 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 LMO2P25791 158 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 RPS9P46781 194 aaKnown RBP19.93■□□□□ 0.78
COL7A1-209ENST00000474432 CYP2J2P51589 502 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 TSPY1Q01534 308 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 STK4Q13043 487 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 VEPH1Q14D04 833 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 NFE2Q16621 373 aaPredicted RBP19.93■□□□□ 0.78
COL7A1-209ENST00000474432 FAM171BQ6P995 826 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 DPH6Q7L8W6 267 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 ADGRF2Q8IZF7 708 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 XXYLT1Q8NBI6 393 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 KIAA0895Q8NCT3 520 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 BCO2Q9BYV7 579 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 ABCB6Q9NP58 842 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 WDR87Q6ZQQ6 2873 aa19.93■□□□□ 0.78
COL7A1-209ENST00000474432 ZNF292O60281 2723 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 FAM237AA0A1B0GTK4 181 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 CHADO15335 359 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 PRPF40AO75400 957 aaKnown RBP19.92■□□□□ 0.78
COL7A1-209ENST00000474432 TNNC2P02585 160 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 CDC25CP30307 473 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 LHX1P48742 406 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 NLRP12P59046 1061 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 MYL7Q01449 175 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 DDR2Q16832 855 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 KNOP1Q1ED39 458 aaKnown RBP19.92■□□□□ 0.78
COL7A1-209ENST00000474432 WDR44Q5JSH3 913 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 CGRRF1Q99675 332 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 SMG9Q9H0W8 520 aaKnown RBP19.92■□□□□ 0.78
COL7A1-209ENST00000474432 OBP2AQ9NY56 170 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 PIAS3Q9Y6X2 628 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 OTOGLQ3ZCN5 2332 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 ANAPC1Q9H1A4 1944 aa19.92■□□□□ 0.78
COL7A1-209ENST00000474432 TADA3O75528 432 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 DLATP10515 647 aaKnown RBP19.91■□□□□ 0.78
COL7A1-209ENST00000474432 MAGEA9P43362 315 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 MLLT6P55198 1093 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-209ENST00000474432 MYO1EQ12965 1108 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 CFAP221Q4G0U5 840 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 ARHGAP15Q53QZ3 475 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 CCDC127Q96BQ5 260 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 ZFYVE19Q96K21 471 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 CRTAC1Q9NQ79 661 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 DMAC2Q9NW81 257 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 SPATA6Q9NWH7 488 aaPredicted RBP19.91■□□□□ 0.78
COL7A1-209ENST00000474432 SPTBN4Q9H254 2564 aa19.91■□□□□ 0.78
COL7A1-209ENST00000474432 ZNF638Q14966 1978 aaKnown RBP19.91■□□□□ 0.78
COL7A1-209ENST00000474432 GPR179Q6PRD1 2367 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 MAN2B1O00754 1011 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 NOL4O94818 638 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 WARSP23381 471 aaKnown RBP19.9■□□□□ 0.78
COL7A1-209ENST00000474432 SOX9P48436 509 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 KMT5BQ4FZB7 885 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 HS2ST1Q7LGA3 356 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 CEP57L1Q8IYX8 460 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 RIN3Q8TB24 985 aa19.9■□□□□ 0.78
COL7A1-209ENST00000474432 FAM3CQ92520 227 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms