RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 LINC01565O15544 149 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 GABBR2O75899 941 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 EPCAMP16422 314 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 PTPN1P18031 435 aaKnown RBP11.05□□□□□ -0.64
CASC3-204ENST00000474190 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
CASC3-204ENST00000474190 LTBRP36941 435 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 LHX1P48742 406 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 POLR2FP61218 127 aaKnown RBP11.05□□□□□ -0.64
CASC3-204ENST00000474190 TPM4P67936 248 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 CETN1Q12798 172 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 GPR17Q13304 367 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 PDE12Q6L8Q7 609 aaKnown RBP11.05□□□□□ -0.64
CASC3-204ENST00000474190 ZNF280DQ6N043 979 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 ACOT1Q86TX2 421 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 FUKQ8N0W3 1084 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 ATAD1Q8NBU5 361 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 ZMIZ2Q8NF64 920 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 ANKRD20A12PQ8NF67 263 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 OR6B3Q8NGW1 331 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 MRFAP1L1Q96HT8 127 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 SYT15Q9BQS2 421 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 B3GNT5Q9BYG0 378 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 IMPG2Q9BZV3 1241 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 ENTPD7Q9NQZ7 604 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.05□□□□□ -0.64
CASC3-204ENST00000474190 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 CDH9Q9ULB4 789 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 NLRC5Q86WI3 1866 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 A8MXQ7 604 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 H7C4K7 107 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 O00370 1275 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 CLDN5O00501 218 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 CYP26A1O43174 497 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 BEST1O76090 585 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 C1RP00736 705 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 P4HA1P13674 534 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 NDUFV1P49821 464 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 GOLGA8FQ08AF8 430 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 GOLGA8DPQ0D2H9 430 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 ARHGAP44Q17R89 818 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 PPP1R26Q5T8A7 1209 aaPredicted RBP11.04□□□□□ -0.64
CASC3-204ENST00000474190 ARHGAP17Q68EM7 881 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 TMEM270Q6UE05 265 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 TMEM184AQ6ZMB5 413 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 ENOSF1Q7L5Y1 443 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 IRF2BP2Q7Z5L9 587 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 RBM23Q86U06 439 aaKnown RBP11.04□□□□□ -0.64
CASC3-204ENST00000474190 TTC30AQ86WT1 665 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 GLYCTKQ8IVS8 523 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 RBBP8NLQ8NC74 664 aaPredicted RBP11.04□□□□□ -0.64
CASC3-204ENST00000474190 B3GALNT2Q8NCR0 500 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 ZNF461Q8TAF7 563 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 MYCBPAPQ8TBZ2 947 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 MYLPFQ96A32 169 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 TMEM176AQ96HP8 235 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 ZNF518BQ9C0D4 1074 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 CLEC1BQ9P126 229 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 NOCTQ9UK39 431 aaKnown RBP11.04□□□□□ -0.64
CASC3-204ENST00000474190 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 HCFC2Q9Y5Z7 792 aa11.04□□□□□ -0.64
CASC3-204ENST00000474190 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 HHLA1C9JL84 531 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 SOAT2O75908 522 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 ADCY5O95622 1261 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 PAEPP09466 180 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 SPATA31D3P0C874 917 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 CCDC130P13994 396 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 ATF2P15336 505 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 CHRNB2P17787 502 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 ATF6P18850 670 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 RFX1P22670 979 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 PCSK1P29120 753 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 NRIP1P48552 1158 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 GPR15P49685 360 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 MFAP3P55082 362 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 DLX2Q07687 328 aaPredicted RBP11.03□□□□□ -0.64
CASC3-204ENST00000474190 ADAM15Q13444 863 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 FILIP1LQ4L180 1135 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 SLC39A12Q504Y0 691 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 MDH1BQ5I0G3 518 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 PDXDC1Q6P996 788 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 POTEHQ6S545 545 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 SPATA31D4Q6ZUB0 917 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 SLC47A2Q86VL8 602 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 PALB2Q86YC2 1186 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 WDTC1Q8N5D0 677 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 EFHBQ8N7U6 833 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
CASC3-204ENST00000474190 PGLYRP2Q96PD5 576 aa11.03□□□□□ -0.64
CASC3-204ENST00000474190 HNRNPABQ99729 332 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms