RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GUCY2FP51841 1108 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CREB5Q02930 508 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SPAG1Q07617 926 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ST3GAL1Q11201 340 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 FOXC1Q12948 553 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 RUNX3Q13761 415 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TRIM29Q14134 588 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 KARSQ15046 597 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ANKRD1Q15327 319 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ZNF174Q15697 407 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ELF2Q15723 593 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ARHGAP15Q53QZ3 475 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SH3PXD2AQ5TCZ1 1133 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 DAB2IPQ5VWQ8 1189 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 NAIF1Q69YI7 327 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TRIM68Q6AZZ1 485 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 OVOS1Q6IE37 1185 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ZPBP2Q6X784 338 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 USP37Q86T82 979 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ITIH5Q86UX2 942 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CMTM8Q8IZV2 173 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 C4orf32Q8N8J7 132 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 IGSF22Q8N9C0 903 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TMEM161BQ8NDZ6 487 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 OR10T2Q8NGX3 314 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 RIN3Q8TB24 985 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 EZH1Q92800 747 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 DRC1Q96MC2 740 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 LPIN3Q9BQK8 851 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TMUB1Q9BVT8 246 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC46A2Q9BY10 475 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 EBF3Q9H4W6 596 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 C17orf75Q9HAS0 396 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 PLEKHA5Q9HAU0 1116 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 FBRSL1Q9HCM7 1045 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 GKN1Q9NS71 199 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 THG1LQ9NWX6 298 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 HSFX1Q9UBD0 423 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC8A2Q9UPR5 921 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 KIAA1024Q9UPX6 916 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CCL26Q9Y258 94 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TSC2P49815 1807 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ATG2BQ96BY7 2078 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 MAST4O15021 2626 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ASCC3Q8N3C0 2202 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ABCA7Q8IZY2 2146 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SRRM3A6NNA2 597 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SFI1A8K8P3 1242 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 PP2D1A8MPX8 630 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 LACTBL1A8MY62 500 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 E9PMD0 336 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 CDX4O14627 284 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 CLDN3O15551 220 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 FAM189A1O60320 539 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 RHOBTB1O94844 696 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 APBB3O95704 486 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 CYP11A1P05108 521 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ADRB2P07550 413 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 CLTAP09496 248 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ODC1P11926 461 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 DRD1P21728 446 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 GUCY2CP25092 1073 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 U2AF2P26368 475 aaKnown RBP eCLIP5.56□□□□□ -1.524e-23■■■■■ 68.3
SNRNP40-204ENST00000474025 NMT1P30419 496 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 GGCXP38435 758 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TNFSF9P41273 254 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 CDR1P51861 262 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 LILRA4P59901 499 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ANAPC15P60006 121 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 GUCY1B3Q02153 619 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 PPP2R3AQ06190 1150 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 STRN3Q13033 797 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 VEPH1Q14D04 833 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 PTPAQ15257 358 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ENOX2Q16206 610 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 MGAT5BQ3V5L5 792 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 FBXO43Q4G163 708 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC39A12Q504Y0 691 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 PMS2CLQ68D20 193 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 RINT1Q6NUQ1 792 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 DSTYKQ6XUX3 929 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 Q6ZNB5 142 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 C1orf186Q6ZWK4 172 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SYT13Q7L8C5 426 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 KCNK18Q7Z418 384 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TMEM150AQ86TG1 271 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 RPLP0P6Q8NHW5 317 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SNX29Q8TEQ0 813 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SPIRE2Q8WWL2 714 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 USP13Q92995 863 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SENP8Q96LD8 212 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 GCNAQ96QF7 691 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SEPT5Q99719 369 aaPredicted RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 NTPCRQ9BSD7 190 aaKnown RBP5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 TIPINQ9BVW5 301 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 SCNM1Q9BWG6 230 aa5.56□□□□□ -1.52
SNRNP40-204ENST00000474025 ZCWPW1Q9H0M4 648 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms