RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PRSS29PA6NIE9 313 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 LGALS16A8MUM7 142 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ACKR2O00590 384 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 CNOT4O95628 575 aaKnown RBP4.96□□□□□ -1.62
BRCA1-212ENST00000473961 GLP2RO95838 553 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ATXN1LP0C7T5 689 aaKnown RBP4.96□□□□□ -1.62
BRCA1-212ENST00000473961 IL1R1P14778 569 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 LRPAP1P30533 357 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 CPT1AP50416 773 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ITGA8P53708 1063 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 DUSP8Q13202 625 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ARHGEF7Q14155 803 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ACAP1Q15027 740 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ADCK5Q3MIX3 580 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 CRB2Q5IJ48 1285 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 RRAGBQ5VZM2 374 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 TMED8Q6PL24 325 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-212ENST00000473961 RINLQ6ZS11 566 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 GAS2L3Q86XJ1 694 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 COLGALT2Q8IYK4 626 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 NAXEQ8NCW5 288 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 ST8SIA2Q92186 375 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 RUBCNQ92622 972 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 LMF1Q96S06 567 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 SENP7Q9BQF6 1050 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 XPNPEP3Q9NQH7 507 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 TMOD4Q9NZQ9 345 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 GPR52Q9Y2T5 361 aa4.96□□□□□ -1.62
BRCA1-212ENST00000473961 K7ESM1 405 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 RAB27BO00194 218 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 POLRMTO00411 1230 aaKnown RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 COQ9O75208 318 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 SLPIP03973 132 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 A1BGP04217 495 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 ITGB1P05556 798 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 ITGA5P08648 1049 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 CKBP12277 381 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 EGR1P18146 543 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 SLC6A4P31645 630 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 CASP2P42575 452 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 PPP2CBP62714 309 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 PPP2CAP67775 309 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 HHEXQ03014 270 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 KRT17Q04695 432 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 LMOD3Q0VAK6 560 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 GALNT1Q10472 559 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 TCF15Q12870 199 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 GRM7Q14831 915 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 MAPKAPK3Q16644 382 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 DCAF17Q5H9S7 520 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 MRNIPQ6NTE8 343 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 ANKRD35Q8N283 1001 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 TMIEQ8NEW7 156 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 RAPGEF4Q8WZA2 1011 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 EID2BQ96D98 161 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 MPP4Q96JB8 637 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 ZNF668Q96K58 619 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 PNKPQ96T60 521 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 PRPF18Q99633 342 aaKnown RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 FAM167BQ9BTA0 163 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 SLITRK6Q9H5Y7 841 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 SAYSD1Q9NPB0 183 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 FBXO34Q9NWN3 711 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 RRN3Q9NYV6 651 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 HESX1Q9UBX0 185 aa4.95□□□□□ -1.62
BRCA1-212ENST00000473961 HERC5Q9UII4 1024 aaKnown RBP4.95□□□□□ -1.62
BRCA1-212ENST00000473961 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 WNT10BO00744 389 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 NCAM2O15394 837 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 EPB41L2O43491 1005 aaKnown RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 KCNQ3O43525 872 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 CCNT2O60583 730 aaKnown RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 KIF20AO95235 890 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 NDST3O95803 873 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 HSP90AA1P07900 732 aaKnown RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 GABRB3P28472 473 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 KCNC1P48547 511 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PAPOLAP51003 745 aaKnown RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 LOXL3P58215 753 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 ADAM17P78536 824 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 NSUN2Q08J23 767 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 FAM214AQ32MH5 1076 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PLA1AQ53H76 456 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 FAXCQ5TGI0 409 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 ANKS6Q68DC2 871 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 TANGO2Q6ICL3 276 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 CYP26C1Q6V0L0 522 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 MED25Q71SY5 747 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PPP1R32Q7Z5V6 425 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 TTC30AQ86WT1 665 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 XYLT1Q86Y38 959 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 CCDC117Q8IWD4 279 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 GLIS1Q8NBF1 620 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PDPRQ8NCN5 879 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 PPHLN1Q8NEY8 458 aaKnown RBP4.94□□□□□ -1.62
BRCA1-212ENST00000473961 KLHL32Q96NJ5 620 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 LRRC37BQ96QE4 947 aa4.94□□□□□ -1.62
BRCA1-212ENST00000473961 MED15Q96RN5 788 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms