RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 EPHA5P54756 1037 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 SMARCB1Q12824 385 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 PLD1Q13393 1074 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 HTR4Q13639 388 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 ZNF667Q5HYK9 610 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 FAM171BQ6P995 826 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 PDZD4Q76G19 769 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-210ENST00000473829 STKLD1Q8NE28 680 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 TAS1R2Q8TE23 839 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 NELFBQ8WX92 580 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 C1QTNF1Q9BXJ1 281 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 DPEP3Q9H4B8 488 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 ZNF334Q9HCZ1 680 aaPredicted RBP20.26■□□□□ 0.83
PTCD3-210ENST00000473829 CDH9Q9ULB4 789 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 ANHXE9PGG2 379 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 CLSTN1O94985 981 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 ASS1P00966 412 aaKnown RBP20.25■□□□□ 0.83
PTCD3-210ENST00000473829 MYL4P12829 197 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 GJA1P17302 382 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 PPP1R2P41236 205 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 EPHB3P54753 998 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 CDH8P55286 799 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 MTMR3Q13615 1198 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 NFE2Q16621 373 aaPredicted RBP20.25■□□□□ 0.83
PTCD3-210ENST00000473829 IQCEQ6IPM2 695 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 GPR152Q8TDT2 470 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 MYLPFQ96A32 169 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 TMEM8AQ9HCN3 771 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 ASAH2Q9NR71 780 aa20.25■□□□□ 0.83
PTCD3-210ENST00000473829 GPR37L1O60883 481 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 CYP2F1P24903 491 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 GNL1P36915 607 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 ASPAP45381 313 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 TUFMP49411 452 aaKnown RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 STX17P56962 302 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 SGSM1Q2NKQ1 1148 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 SDHAF4Q5VUM1 108 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 PARM1Q6UWI2 310 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 DNAJB7Q7Z6W7 309 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 TRIML1Q8N9V2 468 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 OR6B3Q8NGW1 331 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 SHKBP1Q8TBC3 707 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 SEMA4DQ92854 862 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 FGF14Q92915 247 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 PSMG2Q969U7 264 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 MCRS1Q96EZ8 462 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 RPP25Q9BUL9 199 aaKnown RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 SNX25Q9H3E2 840 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 APOBEC3GQ9HC16 384 aaKnown RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 IGSF9Q9P2J2 1179 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 ZFP37Q9Y6Q3 630 aaPredicted RBP20.24■□□□□ 0.83
PTCD3-210ENST00000473829 NUMBLQ9Y6R0 609 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 OBSL1O75147 1896 aa20.24■□□□□ 0.83
PTCD3-210ENST00000473829 NARSO43776 548 aaKnown RBP20.23■□□□□ 0.83
PTCD3-210ENST00000473829 FAM163BP0C2L3 166 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 GTF2H1P32780 548 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 PAK1Q13153 545 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 TDGQ13569 410 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 CFAP221Q4G0U5 840 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 DCAF17Q5H9S7 520 aaPredicted RBP20.23■□□□□ 0.83
PTCD3-210ENST00000473829 TMEM31Q5JXX7 168 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 CYP4A22Q5TCH4 519 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 TRIM67Q6ZTA4 783 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 TAF4BQ92750 862 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 ASIC4Q96FT7 647 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 GBP4Q96PP9 640 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 LRFN3Q9BTN0 628 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 ABCB6Q9NP58 842 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 HMGXB4Q9UGU5 601 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 ASB3Q9Y575 518 aa20.23■□□□□ 0.83
PTCD3-210ENST00000473829 GREB1Q4ZG55 1949 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 A0A1W2PRU2 124 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 MXI1P50539 228 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 NOP14P78316 857 aaKnown RBP20.22■□□□□ 0.83
PTCD3-210ENST00000473829 SIGLEC14Q08ET2 396 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 DDR2Q16832 855 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 CBWD6Q4V339 395 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 MDH1BQ5I0G3 518 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 CBWD3Q5JTY5 395 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 CBWD5Q5RIA9 395 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 TCERG1LQ5VWI1 586 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 KRT39Q6A163 491 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 FOXR2Q6PJQ5 311 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 GAREM2Q75VX8 874 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 SPATA2LQ8IUW3 424 aaPredicted RBP20.22■□□□□ 0.83
PTCD3-210ENST00000473829 LEMD2Q8NC56 503 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 FAM200AQ8TCP9 573 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 GPT2Q8TD30 523 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 SLC35C1Q96A29 364 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 PCED1BQ96HM7 432 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 ZSWIM3Q96MP5 696 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 CEP63Q96MT8 703 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 MED15Q96RN5 788 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 IL21Q9HBE4 155 aa20.22■□□□□ 0.83
PTCD3-210ENST00000473829 DENND4CQ5VZ89 1909 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 TMEM221A6NGB7 291 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 A8MXQ7 604 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 M0R296 226 aa20.21■□□□□ 0.83
PTCD3-210ENST00000473829 ZNF197O14709 1029 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms